Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.83■□□□□ 0.12
TNFSF9P41273 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFSF9P41273 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.83■□□□□ 0.12
TNFSF9P41273 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.83■□□□□ 0.12
TNFSF9P41273 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.83■□□□□ 0.12
TNFSF9P41273 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.83■□□□□ 0.12
TNFSF9P41273 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.83■□□□□ 0.12
TNFSF9P41273 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.83■□□□□ 0.12
TNFSF9P41273 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.83■□□□□ 0.12
TNFSF9P41273 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.83■□□□□ 0.12
TNFSF9P41273 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.83■□□□□ 0.12
TNFSF9P41273 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.83■□□□□ 0.12
TNFSF9P41273 AC092299.1-201ENST00000632679 757 ntBASIC15.83■□□□□ 0.12
TNFSF9P41273 AL139099.5-201ENST00000635274 300 ntBASIC15.83■□□□□ 0.12
TNFSF9P41273 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFSF9P41273 TUBBP5-203ENST00000508529 1334 ntBASIC15.83■□□□□ 0.12
TNFSF9P41273 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TNFSF9P41273 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TNFSF9P41273 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFSF9P41273 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.83■□□□□ 0.12
TNFSF9P41273 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.83■□□□□ 0.12
TNFSF9P41273 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
TNFSF9P41273 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFSF9P41273 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TNFSF9P41273 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TNFSF9P41273 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TNFSF9P41273 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFSF9P41273 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TNFSF9P41273 PCDHA3-202ENST00000532566 4594 ntBASIC15.83■□□□□ 0.12
TNFSF9P41273 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFSF9P41273 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFSF9P41273 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFSF9P41273 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF9P41273 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF9P41273 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF9P41273 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF9P41273 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF9P41273 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF9P41273 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF9P41273 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFSF9P41273 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFSF9P41273 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.82■□□□□ 0.12
TNFSF9P41273 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFSF9P41273 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF9P41273 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF9P41273 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF9P41273 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.82■□□□□ 0.12
TNFSF9P41273 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF9P41273 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.82■□□□□ 0.12
TNFSF9P41273 CALR4P-201ENST00000431943 946 ntBASIC15.82■□□□□ 0.12
TNFSF9P41273 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF9P41273 AC005077.2-201ENST00000449786 690 ntBASIC15.82■□□□□ 0.12
TNFSF9P41273 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.82■□□□□ 0.12
TNFSF9P41273 SPTLC1P5-201ENST00000450718 252 ntBASIC15.82■□□□□ 0.12
TNFSF9P41273 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF9P41273 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF9P41273 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.82■□□□□ 0.12
TNFSF9P41273 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF9P41273 AL132994.2-201ENST00000603120 687 ntBASIC15.82■□□□□ 0.12
TNFSF9P41273 AL136295.7-201ENST00000619226 1200 ntBASIC15.82■□□□□ 0.12
TNFSF9P41273 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF9P41273 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
TNFSF9P41273 AC015802.1-201ENST00000588104 1449 ntBASIC15.82■□□□□ 0.12
TNFSF9P41273 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF9P41273 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFSF9P41273 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF9P41273 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF9P41273 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF9P41273 AC018629.1-201ENST00000623381 1736 ntBASIC15.82■□□□□ 0.12
TNFSF9P41273 RN7SL832P-201ENST00000607781 1756 ntBASIC15.82■□□□□ 0.12
TNFSF9P41273 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
TNFSF9P41273 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
TNFSF9P41273 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFSF9P41273 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFSF9P41273 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF9P41273 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TNFSF9P41273 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF9P41273 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF9P41273 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF9P41273 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TNFSF9P41273 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF9P41273 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TNFSF9P41273 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF9P41273 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF9P41273 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF9P41273 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF9P41273 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF9P41273 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TNFSF9P41273 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF9P41273 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF9P41273 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF9P41273 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF9P41273 CYP46A4P-201ENST00000414953 267 ntBASIC15.81■□□□□ 0.12
TNFSF9P41273 ACTG1P2-201ENST00000415776 1125 ntBASIC15.81■□□□□ 0.12
TNFSF9P41273 ACTG1P11-201ENST00000425411 1125 ntBASIC15.81■□□□□ 0.12
TNFSF9P41273 AC078875.1-201ENST00000431907 724 ntBASIC15.81■□□□□ 0.12
TNFSF9P41273 ST13P19-201ENST00000442505 1124 ntBASIC15.81■□□□□ 0.12
TNFSF9P41273 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF9P41273 AC125604.1-201ENST00000496255 707 ntBASIC15.81■□□□□ 0.12
TNFSF9P41273 RCC2P8-201ENST00000502779 1035 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms