Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CPS1P31327 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPS1P31327 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPS1P31327 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC20.11■□□□□ 0.81
CPS1P31327 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPS1P31327 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPS1P31327 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC20.1■□□□□ 0.81
CPS1P31327 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CPS1P31327 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CPS1P31327 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.1■□□□□ 0.81
CPS1P31327 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPS1P31327 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPS1P31327 CFL1P6-201ENST00000400899 494 ntBASIC20.1■□□□□ 0.81
CPS1P31327 SNRPCP15-201ENST00000424055 192 ntBASIC20.1■□□□□ 0.81
CPS1P31327 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPS1P31327 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC20.1■□□□□ 0.81
CPS1P31327 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC20.1■□□□□ 0.81
CPS1P31327 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC20.1■□□□□ 0.81
CPS1P31327 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC20.1■□□□□ 0.81
CPS1P31327 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC20.1■□□□□ 0.81
CPS1P31327 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CPS1P31327 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC20.1■□□□□ 0.81
CPS1P31327 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC20.1■□□□□ 0.81
CPS1P31327 AC140658.4-201ENST00000561990 352 ntBASIC20.1■□□□□ 0.81
CPS1P31327 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC20.1■□□□□ 0.81
CPS1P31327 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC20.1■□□□□ 0.81
CPS1P31327 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC20.1■□□□□ 0.81
CPS1P31327 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC20.1■□□□□ 0.81
CPS1P31327 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC20.1■□□□□ 0.81
CPS1P31327 BX322534.1-201ENST00000635574 241 ntBASIC20.1■□□□□ 0.81
CPS1P31327 AC215524.1-201ENST00000635696 241 ntBASIC20.1■□□□□ 0.81
CPS1P31327 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
CPS1P31327 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPS1P31327 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC20.1■□□□□ 0.81
CPS1P31327 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPS1P31327 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC20.1■□□□□ 0.81
CPS1P31327 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC20.1■□□□□ 0.81
CPS1P31327 AL050341.2-201ENST00000567508 1541 ntBASIC20.1■□□□□ 0.81
CPS1P31327 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPS1P31327 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC20.1■□□□□ 0.81
CPS1P31327 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPS1P31327 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
CPS1P31327 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPS1P31327 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CPS1P31327 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPS1P31327 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
CPS1P31327 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPS1P31327 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPS1P31327 AL137077.2-201ENST00000635124 1608 ntBASIC20.09■□□□□ 0.81
CPS1P31327 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPS1P31327 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC20.09■□□□□ 0.81
CPS1P31327 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
CPS1P31327 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPS1P31327 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPS1P31327 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPS1P31327 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
CPS1P31327 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC20.09■□□□□ 0.81
CPS1P31327 SNRPD2P2-201ENST00000473818 333 ntBASIC20.09■□□□□ 0.81
CPS1P31327 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPS1P31327 SORD2P-201ENST00000558556 1069 ntBASIC20.09■□□□□ 0.81
CPS1P31327 RN7SL556P-201ENST00000582856 298 ntBASIC20.09■□□□□ 0.81
CPS1P31327 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC20.09■□□□□ 0.81
CPS1P31327 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC20.09■□□□□ 0.81
CPS1P31327 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC20.09■□□□□ 0.81
CPS1P31327 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPS1P31327 MX1-218ENST00000619682 1980 ntTSL 5 BASIC20.09■□□□□ 0.81
CPS1P31327 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC20.09■□□□□ 0.81
CPS1P31327 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPS1P31327 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC20.09■□□□□ 0.81
CPS1P31327 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC20.09■□□□□ 0.81
CPS1P31327 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CPS1P31327 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CPS1P31327 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CPS1P31327 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
CPS1P31327 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPS1P31327 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CPS1P31327 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPS1P31327 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC20.08■□□□□ 0.81
CPS1P31327 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CPS1P31327 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC20.08■□□□□ 0.81
CPS1P31327 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC20.08■□□□□ 0.81
CPS1P31327 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC20.08■□□□□ 0.81
CPS1P31327 TREX1-203ENST00000456089 629 ntTSL 3 BASIC20.08■□□□□ 0.81
CPS1P31327 B9D1-206ENST00000461069 923 ntTSL 2 BASIC20.08■□□□□ 0.81
CPS1P31327 EEF1GP8-201ENST00000506566 1154 ntBASIC20.08■□□□□ 0.81
CPS1P31327 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC20.08■□□□□ 0.81
CPS1P31327 AC016582.2-202ENST00000587765 1094 ntBASIC20.08■□□□□ 0.81
CPS1P31327 OR3A1-202ENST00000615105 966 ntBASIC20.08■□□□□ 0.81
CPS1P31327 AC091769.1-201ENST00000619576 568 ntBASIC20.08■□□□□ 0.81
CPS1P31327 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CPS1P31327 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPS1P31327 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CPS1P31327 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPS1P31327 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CPS1P31327 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPS1P31327 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPS1P31327 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC20.08■□□□□ 0.8
CPS1P31327 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPS1P31327 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CPS1P31327 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms