Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP2A2P16615 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP2A2P16615 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.32■□□□□ 0.2
ATP2A2P16615 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
ATP2A2P16615 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A2P16615 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.32■□□□□ 0.2
ATP2A2P16615 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP2A2P16615 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP2A2P16615 AP001065.2-201ENST00000617205 644 ntBASIC16.32■□□□□ 0.2
ATP2A2P16615 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
ATP2A2P16615 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP2A2P16615 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP2A2P16615 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A2P16615 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A2P16615 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
ATP2A2P16615 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ATP2A2P16615 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 AC105250.1-201ENST00000509378 2057 ntBASIC16.31■□□□□ 0.2
ATP2A2P16615 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2A2P16615 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP2A2P16615 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2A2P16615 AC084364.1-201ENST00000551967 1556 ntBASIC16.31■□□□□ 0.2
ATP2A2P16615 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ATP2A2P16615 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2A2P16615 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP2A2P16615 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP2A2P16615 RPL13AP19-201ENST00000434320 584 ntBASIC16.31■□□□□ 0.2
ATP2A2P16615 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2A2P16615 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2A2P16615 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP2A2P16615 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP2A2P16615 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2A2P16615 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP2A2P16615 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2A2P16615 AC002472.3-201ENST00000640124 621 ntBASIC16.31■□□□□ 0.2
ATP2A2P16615 AL645728.2-202ENST00000641679 227 ntBASIC16.31■□□□□ 0.2
ATP2A2P16615 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ATP2A2P16615 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
ATP2A2P16615 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ATP2A2P16615 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP2A2P16615 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2A2P16615 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ATP2A2P16615 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP2A2P16615 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A2P16615 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP2A2P16615 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A2P16615 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A2P16615 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A2P16615 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2A2P16615 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A2P16615 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2A2P16615 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2A2P16615 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2A2P16615 AC005089.1-201ENST00000619486 2241 ntBASIC16.3■□□□□ 0.2
ATP2A2P16615 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A2P16615 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A2P16615 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP2A2P16615 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A2P16615 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A2P16615 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2A2P16615 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ATP2A2P16615 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2A2P16615 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP2A2P16615 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2A2P16615 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A2P16615 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A2P16615 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A2P16615 AC090616.6-203ENST00000579186 1945 ntBASIC16.3■□□□□ 0.2
ATP2A2P16615 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A2P16615 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A2P16615 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A2P16615 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A2P16615 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ATP2A2P16615 FAM58BP-201ENST00000439056 645 ntBASIC16.3■□□□□ 0.2
ATP2A2P16615 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
ATP2A2P16615 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A2P16615 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2A2P16615 AC132192.2-201ENST00000596206 1147 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms