Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
HOXC6P09630 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HOXC6P09630 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HOXC6P09630 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HOXC6P09630 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HOXC6P09630 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HOXC6P09630 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HOXC6P09630 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC6P09630 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC6P09630 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC6P09630 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC6P09630 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC6P09630 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.41■□□□□ 0.22
HOXC6P09630 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC6P09630 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.41■□□□□ 0.22
HOXC6P09630 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC6P09630 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC6P09630 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.41■□□□□ 0.22
HOXC6P09630 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC6P09630 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC6P09630 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC6P09630 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HOXC6P09630 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
HOXC6P09630 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HOXC6P09630 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC6P09630 ACE3P-201ENST00000423435 1973 ntBASIC16.41■□□□□ 0.22
HOXC6P09630 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.41■□□□□ 0.22
HOXC6P09630 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC6P09630 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.41■□□□□ 0.22
HOXC6P09630 ERP29P1-201ENST00000442902 706 ntBASIC16.41■□□□□ 0.22
HOXC6P09630 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.41■□□□□ 0.22
HOXC6P09630 AC010234.1-201ENST00000494599 870 ntBASIC16.41■□□□□ 0.22
HOXC6P09630 AC084752.1-201ENST00000509766 622 ntBASIC16.41■□□□□ 0.22
HOXC6P09630 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.41■□□□□ 0.22
HOXC6P09630 HERC2P11-201ENST00000562845 725 ntBASIC16.41■□□□□ 0.22
HOXC6P09630 AC100756.2-201ENST00000569537 736 ntBASIC16.41■□□□□ 0.22
HOXC6P09630 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.41■□□□□ 0.22
HOXC6P09630 AC140113.1-201ENST00000603467 169 ntBASIC16.41■□□□□ 0.22
HOXC6P09630 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.41■□□□□ 0.22
HOXC6P09630 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC6P09630 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC6P09630 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC6P09630 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC6P09630 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC6P09630 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC6P09630 LINC00554-201ENST00000564841 3011 ntBASIC16.41■□□□□ 0.22
HOXC6P09630 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC6P09630 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
HOXC6P09630 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.41■□□□□ 0.22
HOXC6P09630 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC6P09630 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HOXC6P09630 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC6P09630 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC6P09630 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC6P09630 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXC6P09630 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC6P09630 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXC6P09630 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HOXC6P09630 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HOXC6P09630 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC6P09630 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXC6P09630 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
HOXC6P09630 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC16.4■□□□□ 0.22
HOXC6P09630 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.4■□□□□ 0.22
HOXC6P09630 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC6P09630 PSMD4P1-201ENST00000433951 1109 ntBASIC16.4■□□□□ 0.22
HOXC6P09630 AL139008.1-201ENST00000437894 228 ntBASIC16.4■□□□□ 0.22
HOXC6P09630 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.4■□□□□ 0.22
HOXC6P09630 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXC6P09630 AREG-202ENST00000502307 956 ntTSL 5 BASIC16.4■□□□□ 0.22
HOXC6P09630 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXC6P09630 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.4■□□□□ 0.22
HOXC6P09630 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXC6P09630 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC16.4■□□□□ 0.22
HOXC6P09630 RN7SL665P-201ENST00000578793 300 ntBASIC16.4■□□□□ 0.22
HOXC6P09630 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
HOXC6P09630 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXC6P09630 AC090386.2-201ENST00000623010 1039 ntBASIC16.4■□□□□ 0.22
HOXC6P09630 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
HOXC6P09630 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC6P09630 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC6P09630 AC006504.5-208ENST00000588784 2401 ntBASIC16.4■□□□□ 0.22
HOXC6P09630 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.4■□□□□ 0.22
HOXC6P09630 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC6P09630 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
HOXC6P09630 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC6P09630 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXC6P09630 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC6P09630 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC6P09630 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC6P09630 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC6P09630 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
HOXC6P09630 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC6P09630 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC6P09630 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.4■□□□□ 0.22
HOXC6P09630 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXC6P09630 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC6P09630 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.4■□□□□ 0.22
HOXC6P09630 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.39■□□□□ 0.22
HOXC6P09630 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms