Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.84■□□□□ 0.13
CHRNA1P02708 AC023824.1-201ENST00000562945 2975 ntBASIC15.84■□□□□ 0.13
CHRNA1P02708 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.83■□□□□ 0.13
CHRNA1P02708 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
CHRNA1P02708 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.83■□□□□ 0.13
CHRNA1P02708 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CHRNA1P02708 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
CHRNA1P02708 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CHRNA1P02708 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.83■□□□□ 0.13
CHRNA1P02708 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CHRNA1P02708 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CHRNA1P02708 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CHRNA1P02708 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CHRNA1P02708 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA1P02708 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CHRNA1P02708 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.83■□□□□ 0.12
CHRNA1P02708 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA1P02708 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.83■□□□□ 0.12
CHRNA1P02708 HIST2H2BA-201ENST00000412169 381 ntBASIC15.83■□□□□ 0.12
CHRNA1P02708 AL627389.1-201ENST00000413508 1182 ntBASIC15.83■□□□□ 0.12
CHRNA1P02708 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.83■□□□□ 0.12
CHRNA1P02708 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC15.83■□□□□ 0.12
CHRNA1P02708 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC15.83■□□□□ 0.12
CHRNA1P02708 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.83■□□□□ 0.12
CHRNA1P02708 MT3-203ENST00000565838 421 ntTSL 3 BASIC15.83■□□□□ 0.12
CHRNA1P02708 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.83■□□□□ 0.12
CHRNA1P02708 AC107464.3-201ENST00000609172 737 ntBASIC15.83■□□□□ 0.12
CHRNA1P02708 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.83■□□□□ 0.12
CHRNA1P02708 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.83■□□□□ 0.12
CHRNA1P02708 HLA-C-210ENST00000640219 976 ntBASIC15.83■□□□□ 0.12
CHRNA1P02708 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.83■□□□□ 0.12
CHRNA1P02708 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CHRNA1P02708 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA1P02708 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA1P02708 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA1P02708 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CHRNA1P02708 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA1P02708 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA1P02708 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA1P02708 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA1P02708 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA1P02708 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA1P02708 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.82■□□□□ 0.12
CHRNA1P02708 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRNA1P02708 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRNA1P02708 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CHRNA1P02708 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 HLA-DMA-203ENST00000395305 777 ntBASIC15.82■□□□□ 0.12
CHRNA1P02708 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRNA1P02708 OR8T1P-201ENST00000421347 918 ntBASIC15.82■□□□□ 0.12
CHRNA1P02708 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CHRNA1P02708 RPL13AP19-201ENST00000434320 584 ntBASIC15.82■□□□□ 0.12
CHRNA1P02708 AC114501.1-201ENST00000445949 172 ntBASIC15.82■□□□□ 0.12
CHRNA1P02708 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC15.82■□□□□ 0.12
CHRNA1P02708 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC15.82■□□□□ 0.12
CHRNA1P02708 IGHV3-37-201ENST00000518544 340 ntBASIC15.82■□□□□ 0.12
CHRNA1P02708 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC15.82■□□□□ 0.12
CHRNA1P02708 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRNA1P02708 MIR3180-2-201ENST00000581748 88 ntBASIC15.82■□□□□ 0.12
CHRNA1P02708 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC15.82■□□□□ 0.12
CHRNA1P02708 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 AC090386.2-201ENST00000623010 1039 ntBASIC15.82■□□□□ 0.12
CHRNA1P02708 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRNA1P02708 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CHRNA1P02708 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CHRNA1P02708 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC15.82■□□□□ 0.12
CHRNA1P02708 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.82■□□□□ 0.12
CHRNA1P02708 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CHRNA1P02708 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.82■□□□□ 0.12
CHRNA1P02708 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 BRD7P5-201ENST00000299197 1822 ntBASIC15.82■□□□□ 0.12
CHRNA1P02708 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRNA1P02708 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.82■□□□□ 0.12
CHRNA1P02708 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.82■□□□□ 0.12
CHRNA1P02708 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA1P02708 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CHRNA1P02708 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms