Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP1P01033 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP1P01033 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TIMP1P01033 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP1P01033 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TIMP1P01033 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.57■□□□□ 0.08
TIMP1P01033 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.57■□□□□ 0.08
TIMP1P01033 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP1P01033 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TIMP1P01033 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP1P01033 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TIMP1P01033 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC15.57■□□□□ 0.08
TIMP1P01033 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC15.57■□□□□ 0.08
TIMP1P01033 KRT18P4-201ENST00000422599 1288 ntBASIC15.57■□□□□ 0.08
TIMP1P01033 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP1P01033 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.57■□□□□ 0.08
TIMP1P01033 AC023906.1-201ENST00000486386 453 ntBASIC15.57■□□□□ 0.08
TIMP1P01033 RN7SL288P-201ENST00000490496 291 ntBASIC15.57■□□□□ 0.08
TIMP1P01033 CHCHD2P2-201ENST00000503744 321 ntBASIC15.57■□□□□ 0.08
TIMP1P01033 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC15.57■□□□□ 0.08
TIMP1P01033 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC15.57■□□□□ 0.08
TIMP1P01033 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC15.57■□□□□ 0.08
TIMP1P01033 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TIMP1P01033 AL009176.1-201ENST00000607876 650 ntBASIC15.57■□□□□ 0.08
TIMP1P01033 COQ4-204ENST00000608951 781 ntTSL 2 BASIC15.57■□□□□ 0.08
TIMP1P01033 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC15.57■□□□□ 0.08
TIMP1P01033 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC15.57■□□□□ 0.08
TIMP1P01033 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP1P01033 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC15.57■□□□□ 0.08
TIMP1P01033 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.57■□□□□ 0.08
TIMP1P01033 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP1P01033 AC011270.2-201ENST00000624293 2550 ntBASIC15.57■□□□□ 0.08
TIMP1P01033 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP1P01033 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP1P01033 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP1P01033 TMBIM7P-203ENST00000641617 1718 ntBASIC15.57■□□□□ 0.08
TIMP1P01033 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.57■□□□□ 0.08
TIMP1P01033 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP1P01033 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP1P01033 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP1P01033 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP1P01033 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC15.56■□□□□ 0.08
TIMP1P01033 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.56■□□□□ 0.08
TIMP1P01033 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP1P01033 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP1P01033 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.56■□□□□ 0.08
TIMP1P01033 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.56■□□□□ 0.08
TIMP1P01033 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
TIMP1P01033 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP1P01033 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TIMP1P01033 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.56■□□□□ 0.08
TIMP1P01033 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.56■□□□□ 0.08
TIMP1P01033 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP1P01033 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.56■□□□□ 0.08
TIMP1P01033 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP1P01033 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP1P01033 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TIMP1P01033 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC15.56■□□□□ 0.08
TIMP1P01033 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC15.56■□□□□ 0.08
TIMP1P01033 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TIMP1P01033 PSAT1P2-201ENST00000426107 972 ntBASIC15.56■□□□□ 0.08
TIMP1P01033 BRI3P1-201ENST00000440440 378 ntBASIC15.56■□□□□ 0.08
TIMP1P01033 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP1P01033 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TIMP1P01033 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC15.56■□□□□ 0.08
TIMP1P01033 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP1P01033 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC15.56■□□□□ 0.08
TIMP1P01033 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC15.56■□□□□ 0.08
TIMP1P01033 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC15.56■□□□□ 0.08
TIMP1P01033 CES1P2-201ENST00000566467 1242 ntBASIC15.56■□□□□ 0.08
TIMP1P01033 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC15.56■□□□□ 0.08
TIMP1P01033 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC15.56■□□□□ 0.08
TIMP1P01033 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.56■□□□□ 0.08
TIMP1P01033 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC15.56■□□□□ 0.08
TIMP1P01033 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.56■□□□□ 0.08
TIMP1P01033 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP1P01033 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP1P01033 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP1P01033 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP1P01033 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.56■□□□□ 0.08
TIMP1P01033 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP1P01033 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP1P01033 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.56■□□□□ 0.08
TIMP1P01033 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP1P01033 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP1P01033 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP1P01033 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP1P01033 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP1P01033 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP1P01033 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.56■□□□□ 0.08
TIMP1P01033 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP1P01033 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP1P01033 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TIMP1P01033 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
TIMP1P01033 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TIMP1P01033 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.55■□□□□ 0.08
TIMP1P01033 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TIMP1P01033 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.55■□□□□ 0.08
TIMP1P01033 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.55■□□□□ 0.08
TIMP1P01033 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms