Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE3O75131 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE3O75131 AL354877.1-201ENST00000424412 413 ntBASIC14.23□□□□□ -0.13
CPNE3O75131 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE3O75131 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE3O75131 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE3O75131 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.23□□□□□ -0.13
CPNE3O75131 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE3O75131 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.23□□□□□ -0.13
CPNE3O75131 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.23□□□□□ -0.13
CPNE3O75131 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE3O75131 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE3O75131 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE3O75131 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE3O75131 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CPNE3O75131 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE3O75131 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
CPNE3O75131 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE3O75131 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CPNE3O75131 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CPNE3O75131 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE3O75131 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE3O75131 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE3O75131 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.23□□□□□ -0.13
CPNE3O75131 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE3O75131 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CPNE3O75131 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.22□□□□□ -0.13
CPNE3O75131 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CPNE3O75131 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.22□□□□□ -0.13
CPNE3O75131 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.22□□□□□ -0.13
CPNE3O75131 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE3O75131 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE3O75131 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CPNE3O75131 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CPNE3O75131 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE3O75131 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CPNE3O75131 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CPNE3O75131 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.22□□□□□ -0.13
CPNE3O75131 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.22□□□□□ -0.13
CPNE3O75131 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.22□□□□□ -0.13
CPNE3O75131 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CPNE3O75131 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE3O75131 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE3O75131 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE3O75131 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE3O75131 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE3O75131 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE3O75131 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE3O75131 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CPNE3O75131 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE3O75131 RN7SKP175-201ENST00000408472 289 ntBASIC14.22□□□□□ -0.13
CPNE3O75131 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.22□□□□□ -0.13
CPNE3O75131 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.22□□□□□ -0.13
CPNE3O75131 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.22□□□□□ -0.13
CPNE3O75131 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE3O75131 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.22□□□□□ -0.13
CPNE3O75131 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.22□□□□□ -0.13
CPNE3O75131 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.22□□□□□ -0.13
CPNE3O75131 AC068587.10-201ENST00000641210 219 ntBASIC14.22□□□□□ -0.13
CPNE3O75131 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CPNE3O75131 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE3O75131 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.22□□□□□ -0.13
CPNE3O75131 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.22□□□□□ -0.13
CPNE3O75131 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.22□□□□□ -0.13
CPNE3O75131 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.22□□□□□ -0.13
CPNE3O75131 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE3O75131 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.22□□□□□ -0.13
CPNE3O75131 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE3O75131 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE3O75131 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE3O75131 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE3O75131 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CPNE3O75131 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CPNE3O75131 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.22□□□□□ -0.13
CPNE3O75131 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE3O75131 CICP23-201ENST00000605013 2741 ntBASIC14.21□□□□□ -0.13
CPNE3O75131 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CPNE3O75131 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CPNE3O75131 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CPNE3O75131 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CPNE3O75131 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.21□□□□□ -0.13
CPNE3O75131 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CPNE3O75131 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.21□□□□□ -0.13
CPNE3O75131 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CPNE3O75131 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CPNE3O75131 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.21□□□□□ -0.13
CPNE3O75131 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CPNE3O75131 AC005912.2-201ENST00000619492 2400 ntBASIC14.21□□□□□ -0.13
CPNE3O75131 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CPNE3O75131 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CPNE3O75131 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CPNE3O75131 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.21□□□□□ -0.13
CPNE3O75131 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CPNE3O75131 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.21□□□□□ -0.13
CPNE3O75131 BX284668.4-201ENST00000453917 508 ntBASIC14.21□□□□□ -0.13
CPNE3O75131 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.21□□□□□ -0.13
CPNE3O75131 SERPINA13P-202ENST00000478994 924 ntBASIC14.21□□□□□ -0.13
CPNE3O75131 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CPNE3O75131 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.21□□□□□ -0.13
CPNE3O75131 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms