Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.45■■□□□ 1.02
CLCA3PQ9Y6N3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.45■■□□□ 1.02
CLCA3PQ9Y6N3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.45■■□□□ 1.02
CLCA3PQ9Y6N3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLCA3PQ9Y6N3 LINC01124-201ENST00000409786 2117 ntBASIC21.44■■□□□ 1.02
CLCA3PQ9Y6N3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCA3PQ9Y6N3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CLCA3PQ9Y6N3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCA3PQ9Y6N3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCA3PQ9Y6N3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.44■■□□□ 1.02
CLCA3PQ9Y6N3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CLCA3PQ9Y6N3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLCA3PQ9Y6N3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCA3PQ9Y6N3 AL139125.2-201ENST00000623134 1869 ntBASIC21.43■■□□□ 1.02
CLCA3PQ9Y6N3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.43■■□□□ 1.02
CLCA3PQ9Y6N3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CLCA3PQ9Y6N3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCA3PQ9Y6N3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.43■■□□□ 1.02
CLCA3PQ9Y6N3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CLCA3PQ9Y6N3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CLCA3PQ9Y6N3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CLCA3PQ9Y6N3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CLCA3PQ9Y6N3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLCA3PQ9Y6N3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLCA3PQ9Y6N3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.42■■□□□ 1.02
CLCA3PQ9Y6N3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCA3PQ9Y6N3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.41■■□□□ 1.02
CLCA3PQ9Y6N3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.41■■□□□ 1.02
CLCA3PQ9Y6N3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCA3PQ9Y6N3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
CLCA3PQ9Y6N3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCA3PQ9Y6N3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CLCA3PQ9Y6N3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.41■■□□□ 1.02
CLCA3PQ9Y6N3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.41■■□□□ 1.02
CLCA3PQ9Y6N3 MIR6724-1-201ENST00000616420 92 ntBASIC21.41■■□□□ 1.02
CLCA3PQ9Y6N3 MIR6724-2-201ENST00000616483 92 ntBASIC21.41■■□□□ 1.02
CLCA3PQ9Y6N3 MIR6724-4-201ENST00000617390 92 ntBASIC21.41■■□□□ 1.02
CLCA3PQ9Y6N3 MIR6724-3-201ENST00000622482 92 ntBASIC21.41■■□□□ 1.02
CLCA3PQ9Y6N3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCA3PQ9Y6N3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCA3PQ9Y6N3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLCA3PQ9Y6N3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLCA3PQ9Y6N3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.4■■□□□ 1.02
CLCA3PQ9Y6N3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCA3PQ9Y6N3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLCA3PQ9Y6N3 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.4■■□□□ 1.02
CLCA3PQ9Y6N3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.4■■□□□ 1.02
CLCA3PQ9Y6N3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLCA3PQ9Y6N3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLCA3PQ9Y6N3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CLCA3PQ9Y6N3 AC141586.4-201ENST00000624558 1573 ntBASIC21.4■■□□□ 1.02
CLCA3PQ9Y6N3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CLCA3PQ9Y6N3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CLCA3PQ9Y6N3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
CLCA3PQ9Y6N3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCA3PQ9Y6N3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCA3PQ9Y6N3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.39■■□□□ 1.01
CLCA3PQ9Y6N3 AC131212.1-201ENST00000613771 668 ntBASIC21.39■■□□□ 1.01
CLCA3PQ9Y6N3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.39■■□□□ 1.01
CLCA3PQ9Y6N3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCA3PQ9Y6N3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.39■■□□□ 1.01
CLCA3PQ9Y6N3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCA3PQ9Y6N3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLCA3PQ9Y6N3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCA3PQ9Y6N3 LINC00543-201ENST00000567234 1845 ntBASIC21.39■■□□□ 1.01
CLCA3PQ9Y6N3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCA3PQ9Y6N3 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.38■■□□□ 1.01
CLCA3PQ9Y6N3 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.38■■□□□ 1.01
CLCA3PQ9Y6N3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLCA3PQ9Y6N3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CLCA3PQ9Y6N3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.38■■□□□ 1.01
CLCA3PQ9Y6N3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLCA3PQ9Y6N3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLCA3PQ9Y6N3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CLCA3PQ9Y6N3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCA3PQ9Y6N3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CLCA3PQ9Y6N3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCA3PQ9Y6N3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.37■■□□□ 1.01
CLCA3PQ9Y6N3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCA3PQ9Y6N3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLCA3PQ9Y6N3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.37■■□□□ 1.01
CLCA3PQ9Y6N3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.37■■□□□ 1.01
CLCA3PQ9Y6N3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.37■■□□□ 1.01
CLCA3PQ9Y6N3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCA3PQ9Y6N3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCA3PQ9Y6N3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCA3PQ9Y6N3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CLCA3PQ9Y6N3 AC005703.6-201ENST00000623265 1329 ntBASIC21.36■■□□□ 1.01
CLCA3PQ9Y6N3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.36■■□□□ 1.01
CLCA3PQ9Y6N3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.36■■□□□ 1.01
CLCA3PQ9Y6N3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLCA3PQ9Y6N3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCA3PQ9Y6N3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.36■■□□□ 1.01
CLCA3PQ9Y6N3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCA3PQ9Y6N3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.36■■□□□ 1.01
CLCA3PQ9Y6N3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCA3PQ9Y6N3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLCA3PQ9Y6N3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCA3PQ9Y6N3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCA3PQ9Y6N3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms