Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGA2Q9Y5H1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHGA2Q9Y5H1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGA2Q9Y5H1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
PCDHGA2Q9Y5H1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGA2Q9Y5H1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDHGA2Q9Y5H1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGA2Q9Y5H1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
PCDHGA2Q9Y5H1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGA2Q9Y5H1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGA2Q9Y5H1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGA2Q9Y5H1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA2Q9Y5H1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHGA2Q9Y5H1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHGA2Q9Y5H1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHGA2Q9Y5H1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA2Q9Y5H1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA2Q9Y5H1 BX842568.3-201ENST00000418104 571 ntBASIC23.1■■□□□ 1.29
PCDHGA2Q9Y5H1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHGA2Q9Y5H1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHGA2Q9Y5H1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.1■■□□□ 1.29
PCDHGA2Q9Y5H1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHGA2Q9Y5H1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA2Q9Y5H1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA2Q9Y5H1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA2Q9Y5H1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDHGA2Q9Y5H1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA2Q9Y5H1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA2Q9Y5H1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
PCDHGA2Q9Y5H1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGA2Q9Y5H1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGA2Q9Y5H1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGA2Q9Y5H1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDHGA2Q9Y5H1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.09■■□□□ 1.29
PCDHGA2Q9Y5H1 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.09■■□□□ 1.29
PCDHGA2Q9Y5H1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHGA2Q9Y5H1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.09■■□□□ 1.29
PCDHGA2Q9Y5H1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGA2Q9Y5H1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGA2Q9Y5H1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGA2Q9Y5H1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGA2Q9Y5H1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.08■■□□□ 1.29
PCDHGA2Q9Y5H1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGA2Q9Y5H1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.08■■□□□ 1.29
PCDHGA2Q9Y5H1 AC241377.3-202ENST00000626088 1088 ntBASIC23.08■■□□□ 1.29
PCDHGA2Q9Y5H1 AC241585.3-202ENST00000628937 1088 ntBASIC23.08■■□□□ 1.29
PCDHGA2Q9Y5H1 AC245100.8-202ENST00000629247 1058 ntBASIC23.08■■□□□ 1.29
PCDHGA2Q9Y5H1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.08■■□□□ 1.29
PCDHGA2Q9Y5H1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGA2Q9Y5H1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGA2Q9Y5H1 AC145676.1-201ENST00000514988 2004 ntBASIC23.08■■□□□ 1.28
PCDHGA2Q9Y5H1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHGA2Q9Y5H1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHGA2Q9Y5H1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.08■■□□□ 1.28
PCDHGA2Q9Y5H1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
PCDHGA2Q9Y5H1 AC010501.1-201ENST00000606270 1962 ntBASIC23.07■■□□□ 1.28
PCDHGA2Q9Y5H1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGA2Q9Y5H1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGA2Q9Y5H1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGA2Q9Y5H1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
PCDHGA2Q9Y5H1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGA2Q9Y5H1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGA2Q9Y5H1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGA2Q9Y5H1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGA2Q9Y5H1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGA2Q9Y5H1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
PCDHGA2Q9Y5H1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDHGA2Q9Y5H1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDHGA2Q9Y5H1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDHGA2Q9Y5H1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.06■■□□□ 1.28
PCDHGA2Q9Y5H1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGA2Q9Y5H1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGA2Q9Y5H1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGA2Q9Y5H1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGA2Q9Y5H1 DUSP8P4-201ENST00000399538 1761 ntBASIC23.05■■□□□ 1.28
PCDHGA2Q9Y5H1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGA2Q9Y5H1 AC004911.1-201ENST00000416316 871 ntBASIC23.05■■□□□ 1.28
PCDHGA2Q9Y5H1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.05■■□□□ 1.28
PCDHGA2Q9Y5H1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGA2Q9Y5H1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGA2Q9Y5H1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
PCDHGA2Q9Y5H1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDHGA2Q9Y5H1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGA2Q9Y5H1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGA2Q9Y5H1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGA2Q9Y5H1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGA2Q9Y5H1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGA2Q9Y5H1 DUX4L2-201ENST00000561772 1275 ntBASIC23.04■■□□□ 1.28
PCDHGA2Q9Y5H1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.04■■□□□ 1.28
PCDHGA2Q9Y5H1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.04■■□□□ 1.28
PCDHGA2Q9Y5H1 DUX4L6-201ENST00000626483 1275 ntBASIC23.04■■□□□ 1.28
PCDHGA2Q9Y5H1 DUX4L1-201ENST00000627662 1275 ntBASIC23.04■■□□□ 1.28
PCDHGA2Q9Y5H1 DUX4L8-201ENST00000629013 1275 ntBASIC23.04■■□□□ 1.28
PCDHGA2Q9Y5H1 DUX4L3-201ENST00000630187 1275 ntBASIC23.04■■□□□ 1.28
PCDHGA2Q9Y5H1 DUX4L7-201ENST00000630678 1275 ntBASIC23.04■■□□□ 1.28
PCDHGA2Q9Y5H1 DUX4L5-201ENST00000630834 1275 ntBASIC23.04■■□□□ 1.28
PCDHGA2Q9Y5H1 AL031602.1-201ENST00000633169 911 ntBASIC23.04■■□□□ 1.28
PCDHGA2Q9Y5H1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGA2Q9Y5H1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.04■■□□□ 1.28
PCDHGA2Q9Y5H1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms