Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
ZFYVE28Q9HCC9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC26.38■■□□□ 1.81
ZFYVE28Q9HCC9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC26.38■■□□□ 1.81
ZFYVE28Q9HCC9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC26.38■■□□□ 1.81
ZFYVE28Q9HCC9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC26.38■■□□□ 1.81
ZFYVE28Q9HCC9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
ZFYVE28Q9HCC9 AL022069.1-201ENST00000568025 1636 ntBASIC26.38■■□□□ 1.81
ZFYVE28Q9HCC9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.38■■□□□ 1.81
ZFYVE28Q9HCC9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ZFYVE28Q9HCC9 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.37■■□□□ 1.81
ZFYVE28Q9HCC9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ZFYVE28Q9HCC9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
ZFYVE28Q9HCC9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC26.37■■□□□ 1.81
ZFYVE28Q9HCC9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.37■■□□□ 1.81
ZFYVE28Q9HCC9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ZFYVE28Q9HCC9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.37■■□□□ 1.81
ZFYVE28Q9HCC9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.37■■□□□ 1.81
ZFYVE28Q9HCC9 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ZFYVE28Q9HCC9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
ZFYVE28Q9HCC9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ZFYVE28Q9HCC9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.36■■□□□ 1.81
ZFYVE28Q9HCC9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ZFYVE28Q9HCC9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ZFYVE28Q9HCC9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
ZFYVE28Q9HCC9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC26.36■■□□□ 1.81
ZFYVE28Q9HCC9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC26.36■■□□□ 1.81
ZFYVE28Q9HCC9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
ZFYVE28Q9HCC9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.36■■□□□ 1.81
ZFYVE28Q9HCC9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ZFYVE28Q9HCC9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
ZFYVE28Q9HCC9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.36■■□□□ 1.81
ZFYVE28Q9HCC9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.35■■□□□ 1.81
ZFYVE28Q9HCC9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.35■■□□□ 1.81
ZFYVE28Q9HCC9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC26.35■■□□□ 1.81
ZFYVE28Q9HCC9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
ZFYVE28Q9HCC9 pRNA.6-201ENST00000610482 90 ntBASIC26.35■■□□□ 1.81
ZFYVE28Q9HCC9 pRNA.5-201ENST00000612139 90 ntBASIC26.35■■□□□ 1.81
ZFYVE28Q9HCC9 pRNA.11-201ENST00000618423 90 ntBASIC26.35■■□□□ 1.81
ZFYVE28Q9HCC9 pRNA.13-201ENST00000619112 90 ntBASIC26.35■■□□□ 1.81
ZFYVE28Q9HCC9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
ZFYVE28Q9HCC9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
ZFYVE28Q9HCC9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ZFYVE28Q9HCC9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ZFYVE28Q9HCC9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ZFYVE28Q9HCC9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ZFYVE28Q9HCC9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.34■■□□□ 1.81
ZFYVE28Q9HCC9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
ZFYVE28Q9HCC9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.34■■□□□ 1.81
ZFYVE28Q9HCC9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC26.34■■□□□ 1.81
ZFYVE28Q9HCC9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ZFYVE28Q9HCC9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ZFYVE28Q9HCC9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
ZFYVE28Q9HCC9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
ZFYVE28Q9HCC9 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
ZFYVE28Q9HCC9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ZFYVE28Q9HCC9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
ZFYVE28Q9HCC9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ZFYVE28Q9HCC9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ZFYVE28Q9HCC9 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZFYVE28Q9HCC9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZFYVE28Q9HCC9 AC010501.1-201ENST00000606270 1962 ntBASIC26.32■■□□□ 1.8
ZFYVE28Q9HCC9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.32■■□□□ 1.8
ZFYVE28Q9HCC9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.31■■□□□ 1.8
ZFYVE28Q9HCC9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ZFYVE28Q9HCC9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
ZFYVE28Q9HCC9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.31■■□□□ 1.8
ZFYVE28Q9HCC9 MIR6084-201ENST00000622012 110 ntBASIC26.31■■□□□ 1.8
ZFYVE28Q9HCC9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ZFYVE28Q9HCC9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ZFYVE28Q9HCC9 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.3■■□□□ 1.8
ZFYVE28Q9HCC9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
ZFYVE28Q9HCC9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.3■■□□□ 1.8
ZFYVE28Q9HCC9 MIR572-201ENST00000384983 95 ntBASIC26.3■■□□□ 1.8
ZFYVE28Q9HCC9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC26.3■■□□□ 1.8
ZFYVE28Q9HCC9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC26.3■■□□□ 1.8
ZFYVE28Q9HCC9 CCDC92B-201ENST00000575506 885 ntBASIC26.3■■□□□ 1.8
ZFYVE28Q9HCC9 NTF6G-201ENST00000591094 616 ntBASIC26.3■■□□□ 1.8
ZFYVE28Q9HCC9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
ZFYVE28Q9HCC9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
ZFYVE28Q9HCC9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
ZFYVE28Q9HCC9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
ZFYVE28Q9HCC9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC26.29■■□□□ 1.8
ZFYVE28Q9HCC9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.29■■□□□ 1.8
ZFYVE28Q9HCC9 AC012414.1-201ENST00000556676 535 ntBASIC26.29■■□□□ 1.8
ZFYVE28Q9HCC9 AL354811.1-201ENST00000610286 706 ntBASIC26.29■■□□□ 1.8
ZFYVE28Q9HCC9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.29■■□□□ 1.8
ZFYVE28Q9HCC9 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
ZFYVE28Q9HCC9 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
ZFYVE28Q9HCC9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ZFYVE28Q9HCC9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ZFYVE28Q9HCC9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.28■■□□□ 1.8
ZFYVE28Q9HCC9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ZFYVE28Q9HCC9 IGHV3-19-201ENST00000521488 291 ntBASIC26.28■■□□□ 1.8
ZFYVE28Q9HCC9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC26.28■■□□□ 1.8
ZFYVE28Q9HCC9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ZFYVE28Q9HCC9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.28■■□□□ 1.8
ZFYVE28Q9HCC9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
ZFYVE28Q9HCC9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ZFYVE28Q9HCC9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.27■■□□□ 1.8
ZFYVE28Q9HCC9 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms