Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.01■■□□□ 1.59
TMEM40Q8WWA1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TMEM40Q8WWA1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TMEM40Q8WWA1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TMEM40Q8WWA1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
TMEM40Q8WWA1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
TMEM40Q8WWA1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25■■□□□ 1.59
TMEM40Q8WWA1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TMEM40Q8WWA1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25■■□□□ 1.59
TMEM40Q8WWA1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25■■□□□ 1.59
TMEM40Q8WWA1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25■■□□□ 1.59
TMEM40Q8WWA1 AP001330.3-201ENST00000520123 633 ntBASIC25■■□□□ 1.59
TMEM40Q8WWA1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TMEM40Q8WWA1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
TMEM40Q8WWA1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TMEM40Q8WWA1 MIR939-201ENST00000401314 82 ntBASIC24.99■■□□□ 1.59
TMEM40Q8WWA1 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.99■■□□□ 1.59
TMEM40Q8WWA1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TMEM40Q8WWA1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.99■■□□□ 1.59
TMEM40Q8WWA1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.99■■□□□ 1.59
TMEM40Q8WWA1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.99■■□□□ 1.59
TMEM40Q8WWA1 AC092171.4-201ENST00000609130 632 ntBASIC24.99■■□□□ 1.59
TMEM40Q8WWA1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.99■■□□□ 1.59
TMEM40Q8WWA1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TMEM40Q8WWA1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TMEM40Q8WWA1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
TMEM40Q8WWA1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TMEM40Q8WWA1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
TMEM40Q8WWA1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TMEM40Q8WWA1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.98■■□□□ 1.59
TMEM40Q8WWA1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TMEM40Q8WWA1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC24.98■■□□□ 1.59
TMEM40Q8WWA1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TMEM40Q8WWA1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
TMEM40Q8WWA1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TMEM40Q8WWA1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TMEM40Q8WWA1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TMEM40Q8WWA1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
TMEM40Q8WWA1 AL161729.1-201ENST00000604104 1402 ntBASIC24.97■■□□□ 1.59
TMEM40Q8WWA1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TMEM40Q8WWA1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.97■■□□□ 1.59
TMEM40Q8WWA1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
TMEM40Q8WWA1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.97■■□□□ 1.59
TMEM40Q8WWA1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TMEM40Q8WWA1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TMEM40Q8WWA1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TMEM40Q8WWA1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.96■■□□□ 1.59
TMEM40Q8WWA1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TMEM40Q8WWA1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TMEM40Q8WWA1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.96■■□□□ 1.59
TMEM40Q8WWA1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TMEM40Q8WWA1 AC006455.2-201ENST00000429931 906 ntBASIC24.96■■□□□ 1.59
TMEM40Q8WWA1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TMEM40Q8WWA1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TMEM40Q8WWA1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
TMEM40Q8WWA1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TMEM40Q8WWA1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.95■■□□□ 1.58
TMEM40Q8WWA1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
TMEM40Q8WWA1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.95■■□□□ 1.58
TMEM40Q8WWA1 AC105265.2-201ENST00000467189 838 ntBASIC24.95■■□□□ 1.58
TMEM40Q8WWA1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
TMEM40Q8WWA1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TMEM40Q8WWA1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.95■■□□□ 1.58
TMEM40Q8WWA1 ALDH1A3-203ENST00000557963 1670 ntBASIC24.94■■□□□ 1.58
TMEM40Q8WWA1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.94■■□□□ 1.58
TMEM40Q8WWA1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.94■■□□□ 1.58
TMEM40Q8WWA1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.94■■□□□ 1.58
TMEM40Q8WWA1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.94■■□□□ 1.58
TMEM40Q8WWA1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
TMEM40Q8WWA1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
TMEM40Q8WWA1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TMEM40Q8WWA1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TMEM40Q8WWA1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TMEM40Q8WWA1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
TMEM40Q8WWA1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
TMEM40Q8WWA1 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.93■■□□□ 1.58
TMEM40Q8WWA1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TMEM40Q8WWA1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TMEM40Q8WWA1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
TMEM40Q8WWA1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.93■■□□□ 1.58
TMEM40Q8WWA1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TMEM40Q8WWA1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TMEM40Q8WWA1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TMEM40Q8WWA1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TMEM40Q8WWA1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TMEM40Q8WWA1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TMEM40Q8WWA1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TMEM40Q8WWA1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
TMEM40Q8WWA1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TMEM40Q8WWA1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.92■■□□□ 1.58
TMEM40Q8WWA1 RARRES2P6-201ENST00000567333 442 ntBASIC24.92■■□□□ 1.58
TMEM40Q8WWA1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.92■■□□□ 1.58
TMEM40Q8WWA1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.92■■□□□ 1.58
TMEM40Q8WWA1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.92■■□□□ 1.58
TMEM40Q8WWA1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
TMEM40Q8WWA1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
TMEM40Q8WWA1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TMEM40Q8WWA1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
TMEM40Q8WWA1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TMEM40Q8WWA1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms