Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.13■□□□□ 0.97
CHD6Q8TD26 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CHD6Q8TD26 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.13■□□□□ 0.97
CHD6Q8TD26 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD6Q8TD26 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.13■□□□□ 0.97
CHD6Q8TD26 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.13■□□□□ 0.97
CHD6Q8TD26 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD6Q8TD26 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHD6Q8TD26 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.12■□□□□ 0.97
CHD6Q8TD26 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD6Q8TD26 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD6Q8TD26 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CHD6Q8TD26 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHD6Q8TD26 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.11■□□□□ 0.97
CHD6Q8TD26 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.11■□□□□ 0.97
CHD6Q8TD26 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CHD6Q8TD26 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHD6Q8TD26 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.11■□□□□ 0.97
CHD6Q8TD26 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CHD6Q8TD26 AC098934.4-201ENST00000564127 592 ntBASIC21.1■□□□□ 0.97
CHD6Q8TD26 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD6Q8TD26 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHD6Q8TD26 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHD6Q8TD26 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.1■□□□□ 0.97
CHD6Q8TD26 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.1■□□□□ 0.97
CHD6Q8TD26 BX255925.1-201ENST00000566954 1854 ntBASIC21.09■□□□□ 0.97
CHD6Q8TD26 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.09■□□□□ 0.97
CHD6Q8TD26 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.09■□□□□ 0.97
CHD6Q8TD26 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHD6Q8TD26 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHD6Q8TD26 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.09■□□□□ 0.97
CHD6Q8TD26 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.09■□□□□ 0.97
CHD6Q8TD26 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHD6Q8TD26 IGHV3-19-201ENST00000521488 291 ntBASIC21.09■□□□□ 0.97
CHD6Q8TD26 AC211429.1-201ENST00000415277 523 ntBASIC21.09■□□□□ 0.97
CHD6Q8TD26 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.09■□□□□ 0.97
CHD6Q8TD26 SLC7A5P2-201ENST00000553010 536 ntBASIC21.09■□□□□ 0.97
CHD6Q8TD26 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHD6Q8TD26 AL050303.2-201ENST00000619798 666 ntBASIC21.09■□□□□ 0.97
CHD6Q8TD26 LINC02228-203ENST00000641970 1355 ntBASIC21.09■□□□□ 0.97
CHD6Q8TD26 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHD6Q8TD26 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHD6Q8TD26 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHD6Q8TD26 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.08■□□□□ 0.97
CHD6Q8TD26 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.08■□□□□ 0.97
CHD6Q8TD26 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.08■□□□□ 0.97
CHD6Q8TD26 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.08■□□□□ 0.97
CHD6Q8TD26 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHD6Q8TD26 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHD6Q8TD26 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.08■□□□□ 0.97
CHD6Q8TD26 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.08■□□□□ 0.97
CHD6Q8TD26 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.08■□□□□ 0.96
CHD6Q8TD26 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CHD6Q8TD26 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.96
CHD6Q8TD26 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.08■□□□□ 0.96
CHD6Q8TD26 TSPY6P-201ENST00000448518 926 ntBASIC21.08■□□□□ 0.96
CHD6Q8TD26 RPS2P4-201ENST00000476944 856 ntBASIC21.07■□□□□ 0.96
CHD6Q8TD26 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.07■□□□□ 0.96
CHD6Q8TD26 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.07■□□□□ 0.96
CHD6Q8TD26 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD6Q8TD26 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CHD6Q8TD26 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CHD6Q8TD26 SLC29A4P1-201ENST00000398760 971 ntBASIC21.07■□□□□ 0.96
CHD6Q8TD26 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.07■□□□□ 0.96
CHD6Q8TD26 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.07■□□□□ 0.96
CHD6Q8TD26 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
CHD6Q8TD26 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.07■□□□□ 0.96
CHD6Q8TD26 AC092118.2-201ENST00000613495 667 ntBASIC21.07■□□□□ 0.96
CHD6Q8TD26 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD6Q8TD26 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.06■□□□□ 0.96
CHD6Q8TD26 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHD6Q8TD26 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CHD6Q8TD26 DUSP5P2-201ENST00000426873 1033 ntBASIC21.06■□□□□ 0.96
CHD6Q8TD26 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.06■□□□□ 0.96
CHD6Q8TD26 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD6Q8TD26 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.06■□□□□ 0.96
CHD6Q8TD26 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CHD6Q8TD26 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.06■□□□□ 0.96
CHD6Q8TD26 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD6Q8TD26 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.06■□□□□ 0.96
CHD6Q8TD26 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD6Q8TD26 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.05■□□□□ 0.96
CHD6Q8TD26 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD6Q8TD26 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CHD6Q8TD26 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CHD6Q8TD26 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD6Q8TD26 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD6Q8TD26 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CHD6Q8TD26 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHD6Q8TD26 AC004854.2-201ENST00000608450 1441 ntBASIC21.04■□□□□ 0.96
CHD6Q8TD26 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD6Q8TD26 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD6Q8TD26 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CHD6Q8TD26 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.04■□□□□ 0.96
CHD6Q8TD26 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHD6Q8TD26 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHD6Q8TD26 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD6Q8TD26 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.03■□□□□ 0.96
CHD6Q8TD26 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHD6Q8TD26 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms