Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AC097639.1-201ENST00000565519 1891 ntBASIC21.58■■□□□ 1.04
SNIP1Q8TAD8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNIP1Q8TAD8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.57■■□□□ 1.04
SNIP1Q8TAD8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SNIP1Q8TAD8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNIP1Q8TAD8 AL358852.1-201ENST00000623174 1268 ntBASIC21.57■■□□□ 1.04
SNIP1Q8TAD8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SNIP1Q8TAD8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.56■■□□□ 1.04
SNIP1Q8TAD8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SNIP1Q8TAD8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNIP1Q8TAD8 AC006455.2-201ENST00000429931 906 ntBASIC21.56■■□□□ 1.04
SNIP1Q8TAD8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.56■■□□□ 1.04
SNIP1Q8TAD8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SNIP1Q8TAD8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.56■■□□□ 1.04
SNIP1Q8TAD8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.56■■□□□ 1.04
SNIP1Q8TAD8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.56■■□□□ 1.04
SNIP1Q8TAD8 MIR3181-201ENST00000578512 73 ntBASIC21.56■■□□□ 1.04
SNIP1Q8TAD8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SNIP1Q8TAD8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SNIP1Q8TAD8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNIP1Q8TAD8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SNIP1Q8TAD8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.55■■□□□ 1.04
SNIP1Q8TAD8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SNIP1Q8TAD8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SNIP1Q8TAD8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.55■■□□□ 1.04
SNIP1Q8TAD8 AC126544.1-201ENST00000580842 1059 ntBASIC21.55■■□□□ 1.04
SNIP1Q8TAD8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.55■■□□□ 1.04
SNIP1Q8TAD8 AC009086.3-201ENST00000623486 1008 ntBASIC21.55■■□□□ 1.04
SNIP1Q8TAD8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.55■■□□□ 1.04
SNIP1Q8TAD8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNIP1Q8TAD8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNIP1Q8TAD8 AC131274.2-201ENST00000580697 1507 ntBASIC21.55■■□□□ 1.04
SNIP1Q8TAD8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.55■■□□□ 1.04
SNIP1Q8TAD8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNIP1Q8TAD8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SNIP1Q8TAD8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNIP1Q8TAD8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SNIP1Q8TAD8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.54■■□□□ 1.04
SNIP1Q8TAD8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SNIP1Q8TAD8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.54■■□□□ 1.04
SNIP1Q8TAD8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SNIP1Q8TAD8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SNIP1Q8TAD8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNIP1Q8TAD8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.53■■□□□ 1.04
SNIP1Q8TAD8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNIP1Q8TAD8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SNIP1Q8TAD8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.53■■□□□ 1.04
SNIP1Q8TAD8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.53■■□□□ 1.04
SNIP1Q8TAD8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.53■■□□□ 1.04
SNIP1Q8TAD8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNIP1Q8TAD8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNIP1Q8TAD8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SNIP1Q8TAD8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SNIP1Q8TAD8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.53■■□□□ 1.04
SNIP1Q8TAD8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNIP1Q8TAD8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNIP1Q8TAD8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SNIP1Q8TAD8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SNIP1Q8TAD8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNIP1Q8TAD8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
SNIP1Q8TAD8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SNIP1Q8TAD8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SNIP1Q8TAD8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.52■■□□□ 1.04
SNIP1Q8TAD8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.52■■□□□ 1.04
SNIP1Q8TAD8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.52■■□□□ 1.04
SNIP1Q8TAD8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.52■■□□□ 1.04
SNIP1Q8TAD8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.52■■□□□ 1.04
SNIP1Q8TAD8 TSPY26P-201ENST00000476365 1326 ntBASIC21.52■■□□□ 1.03
SNIP1Q8TAD8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SNIP1Q8TAD8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SNIP1Q8TAD8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SNIP1Q8TAD8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SNIP1Q8TAD8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
SNIP1Q8TAD8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNIP1Q8TAD8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.51■■□□□ 1.03
SNIP1Q8TAD8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNIP1Q8TAD8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.51■■□□□ 1.03
SNIP1Q8TAD8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.51■■□□□ 1.03
SNIP1Q8TAD8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.51■■□□□ 1.03
SNIP1Q8TAD8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNIP1Q8TAD8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNIP1Q8TAD8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNIP1Q8TAD8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNIP1Q8TAD8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNIP1Q8TAD8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNIP1Q8TAD8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNIP1Q8TAD8 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.5■■□□□ 1.03
SNIP1Q8TAD8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SNIP1Q8TAD8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNIP1Q8TAD8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SNIP1Q8TAD8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNIP1Q8TAD8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNIP1Q8TAD8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
SNIP1Q8TAD8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNIP1Q8TAD8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNIP1Q8TAD8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SNIP1Q8TAD8 HLA-L-209ENST00000420110 1011 ntBASIC21.48■■□□□ 1.03
SNIP1Q8TAD8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.48■■□□□ 1.03
SNIP1Q8TAD8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.48■■□□□ 1.03
SNIP1Q8TAD8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms