Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
TTC39CQ8N584 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
TTC39CQ8N584 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
TTC39CQ8N584 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TTC39CQ8N584 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.28■■□□□ 1.48
TTC39CQ8N584 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TTC39CQ8N584 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TTC39CQ8N584 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TTC39CQ8N584 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
TTC39CQ8N584 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TTC39CQ8N584 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TTC39CQ8N584 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TTC39CQ8N584 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
TTC39CQ8N584 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TTC39CQ8N584 AL356441.2-201ENST00000443009 864 ntBASIC24.27■■□□□ 1.48
TTC39CQ8N584 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.27■■□□□ 1.48
TTC39CQ8N584 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TTC39CQ8N584 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TTC39CQ8N584 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TTC39CQ8N584 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TTC39CQ8N584 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TTC39CQ8N584 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
TTC39CQ8N584 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.26■■□□□ 1.47
TTC39CQ8N584 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TTC39CQ8N584 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TTC39CQ8N584 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TTC39CQ8N584 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
TTC39CQ8N584 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TTC39CQ8N584 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
TTC39CQ8N584 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TTC39CQ8N584 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
TTC39CQ8N584 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TTC39CQ8N584 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
TTC39CQ8N584 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.24■■□□□ 1.47
TTC39CQ8N584 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.24■■□□□ 1.47
TTC39CQ8N584 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TTC39CQ8N584 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
TTC39CQ8N584 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.23■■□□□ 1.47
TTC39CQ8N584 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TTC39CQ8N584 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
TTC39CQ8N584 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
TTC39CQ8N584 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
TTC39CQ8N584 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TTC39CQ8N584 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
TTC39CQ8N584 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.23■■□□□ 1.47
TTC39CQ8N584 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
TTC39CQ8N584 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
TTC39CQ8N584 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.22■■□□□ 1.47
TTC39CQ8N584 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
TTC39CQ8N584 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TTC39CQ8N584 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TTC39CQ8N584 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TTC39CQ8N584 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
TTC39CQ8N584 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TTC39CQ8N584 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TTC39CQ8N584 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
TTC39CQ8N584 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TTC39CQ8N584 ABCB10P4-201ENST00000566803 2184 ntBASIC24.21■■□□□ 1.47
TTC39CQ8N584 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.21■■□□□ 1.47
TTC39CQ8N584 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.21■■□□□ 1.47
TTC39CQ8N584 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
TTC39CQ8N584 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TTC39CQ8N584 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
TTC39CQ8N584 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
TTC39CQ8N584 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.2■■□□□ 1.46
TTC39CQ8N584 AL356740.2-201ENST00000601559 647 ntBASIC24.2■■□□□ 1.46
TTC39CQ8N584 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TTC39CQ8N584 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.2■■□□□ 1.46
TTC39CQ8N584 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.2■■□□□ 1.46
TTC39CQ8N584 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.19■■□□□ 1.46
TTC39CQ8N584 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.19■■□□□ 1.46
TTC39CQ8N584 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TTC39CQ8N584 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TTC39CQ8N584 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TTC39CQ8N584 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TTC39CQ8N584 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TTC39CQ8N584 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TTC39CQ8N584 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
TTC39CQ8N584 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.18■■□□□ 1.46
TTC39CQ8N584 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TTC39CQ8N584 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TTC39CQ8N584 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
TTC39CQ8N584 MIR3621-201ENST00000580529 85 ntBASIC24.18■■□□□ 1.46
TTC39CQ8N584 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TTC39CQ8N584 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TTC39CQ8N584 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
TTC39CQ8N584 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TTC39CQ8N584 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TTC39CQ8N584 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TTC39CQ8N584 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TTC39CQ8N584 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TTC39CQ8N584 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TTC39CQ8N584 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TTC39CQ8N584 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.16■■□□□ 1.46
TTC39CQ8N584 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.16■■□□□ 1.46
TTC39CQ8N584 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TTC39CQ8N584 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TTC39CQ8N584 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.16■■□□□ 1.46
TTC39CQ8N584 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.16■■□□□ 1.46
TTC39CQ8N584 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms