Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
DDX60Q8IY21 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
DDX60Q8IY21 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
DDX60Q8IY21 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
DDX60Q8IY21 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
DDX60Q8IY21 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC28.49■■■□□ 2.15
DDX60Q8IY21 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
DDX60Q8IY21 MAG-206ENST00000597035 542 ntTSL 4 BASIC28.49■■■□□ 2.15
DDX60Q8IY21 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
DDX60Q8IY21 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
DDX60Q8IY21 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
DDX60Q8IY21 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC28.48■■■□□ 2.15
DDX60Q8IY21 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC28.48■■■□□ 2.15
DDX60Q8IY21 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
DDX60Q8IY21 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
DDX60Q8IY21 HLA-L-211ENST00000482052 1765 ntBASIC28.47■■■□□ 2.15
DDX60Q8IY21 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
DDX60Q8IY21 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
DDX60Q8IY21 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
DDX60Q8IY21 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC28.47■■■□□ 2.15
DDX60Q8IY21 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
DDX60Q8IY21 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
DDX60Q8IY21 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC28.46■■■□□ 2.15
DDX60Q8IY21 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
DDX60Q8IY21 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
DDX60Q8IY21 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
DDX60Q8IY21 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
DDX60Q8IY21 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
DDX60Q8IY21 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
DDX60Q8IY21 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
DDX60Q8IY21 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC28.45■■■□□ 2.14
DDX60Q8IY21 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
DDX60Q8IY21 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.45■■■□□ 2.14
DDX60Q8IY21 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.14
DDX60Q8IY21 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC28.45■■■□□ 2.14
DDX60Q8IY21 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
DDX60Q8IY21 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
DDX60Q8IY21 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
DDX60Q8IY21 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC28.44■■■□□ 2.14
DDX60Q8IY21 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
DDX60Q8IY21 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
DDX60Q8IY21 AC027682.1-201ENST00000562846 899 ntBASIC28.44■■■□□ 2.14
DDX60Q8IY21 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
DDX60Q8IY21 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
DDX60Q8IY21 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
DDX60Q8IY21 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC28.44■■■□□ 2.14
DDX60Q8IY21 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
DDX60Q8IY21 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
DDX60Q8IY21 SNX3-202ENST00000349379 890 ntTSL 2 BASIC28.43■■■□□ 2.14
DDX60Q8IY21 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
DDX60Q8IY21 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
DDX60Q8IY21 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
DDX60Q8IY21 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.43■■■□□ 2.14
DDX60Q8IY21 EI24-204ENST00000527235 1625 ntTSL 5 BASIC28.43■■■□□ 2.14
DDX60Q8IY21 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC28.43■■■□□ 2.14
DDX60Q8IY21 AL138724.1-201ENST00000606771 1088 ntBASIC28.43■■■□□ 2.14
DDX60Q8IY21 CA15P2-201ENST00000611168 834 ntBASIC28.43■■■□□ 2.14
DDX60Q8IY21 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
DDX60Q8IY21 AC136469.2-201ENST00000623944 1028 ntBASIC28.43■■■□□ 2.14
DDX60Q8IY21 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
DDX60Q8IY21 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
DDX60Q8IY21 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC28.42■■■□□ 2.14
DDX60Q8IY21 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
DDX60Q8IY21 AC091305.1-201ENST00000479476 895 ntBASIC28.42■■■□□ 2.14
DDX60Q8IY21 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC28.42■■■□□ 2.14
DDX60Q8IY21 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC28.42■■■□□ 2.14
DDX60Q8IY21 RASA4CP-201ENST00000424092 1398 ntBASIC28.42■■■□□ 2.14
DDX60Q8IY21 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
DDX60Q8IY21 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC28.41■■■□□ 2.14
DDX60Q8IY21 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
DDX60Q8IY21 AC092171.4-201ENST00000609130 632 ntBASIC28.41■■■□□ 2.14
DDX60Q8IY21 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
DDX60Q8IY21 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
DDX60Q8IY21 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
DDX60Q8IY21 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC28.41■■■□□ 2.14
DDX60Q8IY21 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
DDX60Q8IY21 STOX2-205ENST00000513034 807 ntTSL 3 BASIC28.4■■■□□ 2.14
DDX60Q8IY21 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
DDX60Q8IY21 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC28.4■■■□□ 2.14
DDX60Q8IY21 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
DDX60Q8IY21 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC28.4■■■□□ 2.14
DDX60Q8IY21 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC28.4■■■□□ 2.14
DDX60Q8IY21 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC28.4■■■□□ 2.14
DDX60Q8IY21 AC099791.1-201ENST00000416440 715 ntBASIC28.4■■■□□ 2.14
DDX60Q8IY21 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC28.4■■■□□ 2.14
DDX60Q8IY21 AC241377.3-202ENST00000626088 1088 ntBASIC28.4■■■□□ 2.14
DDX60Q8IY21 AC241585.3-202ENST00000628937 1088 ntBASIC28.4■■■□□ 2.14
DDX60Q8IY21 AC245100.8-202ENST00000629247 1058 ntBASIC28.4■■■□□ 2.14
DDX60Q8IY21 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
DDX60Q8IY21 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
DDX60Q8IY21 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
DDX60Q8IY21 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
DDX60Q8IY21 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
DDX60Q8IY21 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC28.39■■■□□ 2.14
DDX60Q8IY21 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC28.39■■■□□ 2.14
DDX60Q8IY21 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
DDX60Q8IY21 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
DDX60Q8IY21 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC28.38■■■□□ 2.13
DDX60Q8IY21 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
DDX60Q8IY21 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC28.38■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms