Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.13■□□□□ 0.97
C9orf40Q8IXQ3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.13■□□□□ 0.97
C9orf40Q8IXQ3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.13■□□□□ 0.97
C9orf40Q8IXQ3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C9orf40Q8IXQ3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
C9orf40Q8IXQ3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.12■□□□□ 0.97
C9orf40Q8IXQ3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
C9orf40Q8IXQ3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
C9orf40Q8IXQ3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
C9orf40Q8IXQ3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
C9orf40Q8IXQ3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.12■□□□□ 0.97
C9orf40Q8IXQ3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
C9orf40Q8IXQ3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
C9orf40Q8IXQ3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
C9orf40Q8IXQ3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
C9orf40Q8IXQ3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
C9orf40Q8IXQ3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C9orf40Q8IXQ3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.11■□□□□ 0.97
C9orf40Q8IXQ3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.11■□□□□ 0.97
C9orf40Q8IXQ3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.11■□□□□ 0.97
C9orf40Q8IXQ3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
C9orf40Q8IXQ3 AL356740.2-201ENST00000601559 647 ntBASIC21.11■□□□□ 0.97
C9orf40Q8IXQ3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.11■□□□□ 0.97
C9orf40Q8IXQ3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
C9orf40Q8IXQ3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C9orf40Q8IXQ3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf40Q8IXQ3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf40Q8IXQ3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf40Q8IXQ3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf40Q8IXQ3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.1■□□□□ 0.97
C9orf40Q8IXQ3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.1■□□□□ 0.97
C9orf40Q8IXQ3 ABCB10P4-201ENST00000566803 2184 ntBASIC21.1■□□□□ 0.97
C9orf40Q8IXQ3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf40Q8IXQ3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf40Q8IXQ3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf40Q8IXQ3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf40Q8IXQ3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf40Q8IXQ3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf40Q8IXQ3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.09■□□□□ 0.97
C9orf40Q8IXQ3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.09■□□□□ 0.97
C9orf40Q8IXQ3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.09■□□□□ 0.97
C9orf40Q8IXQ3 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.09■□□□□ 0.97
C9orf40Q8IXQ3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.09■□□□□ 0.97
C9orf40Q8IXQ3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.09■□□□□ 0.97
C9orf40Q8IXQ3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.09■□□□□ 0.97
C9orf40Q8IXQ3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf40Q8IXQ3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf40Q8IXQ3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf40Q8IXQ3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
C9orf40Q8IXQ3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
C9orf40Q8IXQ3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
C9orf40Q8IXQ3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.08■□□□□ 0.97
C9orf40Q8IXQ3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
C9orf40Q8IXQ3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.08■□□□□ 0.97
C9orf40Q8IXQ3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
C9orf40Q8IXQ3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.07■□□□□ 0.96
C9orf40Q8IXQ3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.07■□□□□ 0.96
C9orf40Q8IXQ3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
C9orf40Q8IXQ3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
C9orf40Q8IXQ3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
C9orf40Q8IXQ3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
C9orf40Q8IXQ3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
C9orf40Q8IXQ3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
C9orf40Q8IXQ3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
C9orf40Q8IXQ3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
C9orf40Q8IXQ3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
C9orf40Q8IXQ3 AC093323.1-202ENST00000635031 2045 ntBASIC21.06■□□□□ 0.96
C9orf40Q8IXQ3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
C9orf40Q8IXQ3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
C9orf40Q8IXQ3 AC131281.2-201ENST00000520478 145 ntBASIC21.06■□□□□ 0.96
C9orf40Q8IXQ3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.06■□□□□ 0.96
C9orf40Q8IXQ3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.06■□□□□ 0.96
C9orf40Q8IXQ3 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.06■□□□□ 0.96
C9orf40Q8IXQ3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
C9orf40Q8IXQ3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
C9orf40Q8IXQ3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
C9orf40Q8IXQ3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
C9orf40Q8IXQ3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
C9orf40Q8IXQ3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
C9orf40Q8IXQ3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
C9orf40Q8IXQ3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
C9orf40Q8IXQ3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.05■□□□□ 0.96
C9orf40Q8IXQ3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
C9orf40Q8IXQ3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
C9orf40Q8IXQ3 AL512631.2-201ENST00000604634 923 ntBASIC21.05■□□□□ 0.96
C9orf40Q8IXQ3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.05■□□□□ 0.96
C9orf40Q8IXQ3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.05■□□□□ 0.96
C9orf40Q8IXQ3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
C9orf40Q8IXQ3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf40Q8IXQ3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.04■□□□□ 0.96
C9orf40Q8IXQ3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf40Q8IXQ3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf40Q8IXQ3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.04■□□□□ 0.96
C9orf40Q8IXQ3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf40Q8IXQ3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf40Q8IXQ3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf40Q8IXQ3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf40Q8IXQ3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.04■□□□□ 0.96
C9orf40Q8IXQ3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
C9orf40Q8IXQ3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms