Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CROCCP3Q8IVE0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
CROCCP3Q8IVE0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CROCCP3Q8IVE0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CROCCP3Q8IVE0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.6■□□□□ 0.89
CROCCP3Q8IVE0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CROCCP3Q8IVE0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.6■□□□□ 0.89
CROCCP3Q8IVE0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CROCCP3Q8IVE0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CROCCP3Q8IVE0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CROCCP3Q8IVE0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CROCCP3Q8IVE0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CROCCP3Q8IVE0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.59■□□□□ 0.89
CROCCP3Q8IVE0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CROCCP3Q8IVE0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
CROCCP3Q8IVE0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.59■□□□□ 0.89
CROCCP3Q8IVE0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CROCCP3Q8IVE0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.59■□□□□ 0.89
CROCCP3Q8IVE0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.59■□□□□ 0.89
CROCCP3Q8IVE0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CROCCP3Q8IVE0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.59■□□□□ 0.89
CROCCP3Q8IVE0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.59■□□□□ 0.89
CROCCP3Q8IVE0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CROCCP3Q8IVE0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CROCCP3Q8IVE0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CROCCP3Q8IVE0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CROCCP3Q8IVE0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.58■□□□□ 0.89
CROCCP3Q8IVE0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CROCCP3Q8IVE0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CROCCP3Q8IVE0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CROCCP3Q8IVE0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CROCCP3Q8IVE0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CROCCP3Q8IVE0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CROCCP3Q8IVE0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CROCCP3Q8IVE0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
CROCCP3Q8IVE0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CROCCP3Q8IVE0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CROCCP3Q8IVE0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.57■□□□□ 0.88
CROCCP3Q8IVE0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CROCCP3Q8IVE0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CROCCP3Q8IVE0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CROCCP3Q8IVE0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CROCCP3Q8IVE0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CROCCP3Q8IVE0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CROCCP3Q8IVE0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CROCCP3Q8IVE0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CROCCP3Q8IVE0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CROCCP3Q8IVE0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CROCCP3Q8IVE0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CROCCP3Q8IVE0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.57■□□□□ 0.88
CROCCP3Q8IVE0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CROCCP3Q8IVE0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CROCCP3Q8IVE0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CROCCP3Q8IVE0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CROCCP3Q8IVE0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CROCCP3Q8IVE0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.56■□□□□ 0.88
CROCCP3Q8IVE0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CROCCP3Q8IVE0 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.56■□□□□ 0.88
CROCCP3Q8IVE0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CROCCP3Q8IVE0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CROCCP3Q8IVE0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CROCCP3Q8IVE0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CROCCP3Q8IVE0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.56■□□□□ 0.88
CROCCP3Q8IVE0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CROCCP3Q8IVE0 AL359504.2-201ENST00000605506 1601 ntBASIC20.56■□□□□ 0.88
CROCCP3Q8IVE0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CROCCP3Q8IVE0 AC242852.2-201ENST00000615738 1807 ntBASIC20.55■□□□□ 0.88
CROCCP3Q8IVE0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CROCCP3Q8IVE0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CROCCP3Q8IVE0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CROCCP3Q8IVE0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CROCCP3Q8IVE0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.55■□□□□ 0.88
CROCCP3Q8IVE0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CROCCP3Q8IVE0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CROCCP3Q8IVE0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CROCCP3Q8IVE0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CROCCP3Q8IVE0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.54■□□□□ 0.88
CROCCP3Q8IVE0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CROCCP3Q8IVE0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CROCCP3Q8IVE0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CROCCP3Q8IVE0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CROCCP3Q8IVE0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.54■□□□□ 0.88
CROCCP3Q8IVE0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CROCCP3Q8IVE0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CROCCP3Q8IVE0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.53■□□□□ 0.88
CROCCP3Q8IVE0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CROCCP3Q8IVE0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CROCCP3Q8IVE0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CROCCP3Q8IVE0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.53■□□□□ 0.88
CROCCP3Q8IVE0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CROCCP3Q8IVE0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CROCCP3Q8IVE0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CROCCP3Q8IVE0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CROCCP3Q8IVE0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CROCCP3Q8IVE0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CROCCP3Q8IVE0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CROCCP3Q8IVE0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CROCCP3Q8IVE0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CROCCP3Q8IVE0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CROCCP3Q8IVE0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms