Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
FAM90A1Q86YD7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FAM90A1Q86YD7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FAM90A1Q86YD7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FAM90A1Q86YD7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.17■□□□□ 0.66
FAM90A1Q86YD7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM90A1Q86YD7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.17■□□□□ 0.66
FAM90A1Q86YD7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FAM90A1Q86YD7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM90A1Q86YD7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM90A1Q86YD7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM90A1Q86YD7 AC010997.5-201ENST00000609182 354 ntBASIC19.17■□□□□ 0.66
FAM90A1Q86YD7 MIR6722-201ENST00000617286 78 ntBASIC19.17■□□□□ 0.66
FAM90A1Q86YD7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.17■□□□□ 0.66
FAM90A1Q86YD7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM90A1Q86YD7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.17■□□□□ 0.66
FAM90A1Q86YD7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM90A1Q86YD7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
FAM90A1Q86YD7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM90A1Q86YD7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
FAM90A1Q86YD7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
FAM90A1Q86YD7 ABCB10P4-201ENST00000566803 2184 ntBASIC19.16■□□□□ 0.66
FAM90A1Q86YD7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FAM90A1Q86YD7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FAM90A1Q86YD7 KRT16P3-201ENST00000439127 1283 ntBASIC19.16■□□□□ 0.66
FAM90A1Q86YD7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FAM90A1Q86YD7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FAM90A1Q86YD7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
FAM90A1Q86YD7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.15■□□□□ 0.66
FAM90A1Q86YD7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FAM90A1Q86YD7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FAM90A1Q86YD7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FAM90A1Q86YD7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
FAM90A1Q86YD7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
FAM90A1Q86YD7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.15■□□□□ 0.66
FAM90A1Q86YD7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FAM90A1Q86YD7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
FAM90A1Q86YD7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
FAM90A1Q86YD7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
FAM90A1Q86YD7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FAM90A1Q86YD7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FAM90A1Q86YD7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FAM90A1Q86YD7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FAM90A1Q86YD7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FAM90A1Q86YD7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FAM90A1Q86YD7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.14■□□□□ 0.65
FAM90A1Q86YD7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.14■□□□□ 0.65
FAM90A1Q86YD7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
FAM90A1Q86YD7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.14■□□□□ 0.65
FAM90A1Q86YD7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.14■□□□□ 0.65
FAM90A1Q86YD7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FAM90A1Q86YD7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FAM90A1Q86YD7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FAM90A1Q86YD7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.13■□□□□ 0.65
FAM90A1Q86YD7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
FAM90A1Q86YD7 AL356441.2-201ENST00000443009 864 ntBASIC19.13■□□□□ 0.65
FAM90A1Q86YD7 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.13■□□□□ 0.65
FAM90A1Q86YD7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.13■□□□□ 0.65
FAM90A1Q86YD7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
FAM90A1Q86YD7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
FAM90A1Q86YD7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.13■□□□□ 0.65
FAM90A1Q86YD7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FAM90A1Q86YD7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FAM90A1Q86YD7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.13■□□□□ 0.65
FAM90A1Q86YD7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FAM90A1Q86YD7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.12■□□□□ 0.65
FAM90A1Q86YD7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
FAM90A1Q86YD7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FAM90A1Q86YD7 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.12■□□□□ 0.65
FAM90A1Q86YD7 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.12■□□□□ 0.65
FAM90A1Q86YD7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FAM90A1Q86YD7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FAM90A1Q86YD7 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.12■□□□□ 0.65
FAM90A1Q86YD7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.12■□□□□ 0.65
FAM90A1Q86YD7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.12■□□□□ 0.65
FAM90A1Q86YD7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FAM90A1Q86YD7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.12■□□□□ 0.65
FAM90A1Q86YD7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.11■□□□□ 0.65
FAM90A1Q86YD7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
FAM90A1Q86YD7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
FAM90A1Q86YD7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
FAM90A1Q86YD7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FAM90A1Q86YD7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FAM90A1Q86YD7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FAM90A1Q86YD7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FAM90A1Q86YD7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FAM90A1Q86YD7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.1■□□□□ 0.65
FAM90A1Q86YD7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
FAM90A1Q86YD7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.1■□□□□ 0.65
FAM90A1Q86YD7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
FAM90A1Q86YD7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.1■□□□□ 0.65
FAM90A1Q86YD7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.1■□□□□ 0.65
FAM90A1Q86YD7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
FAM90A1Q86YD7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FAM90A1Q86YD7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FAM90A1Q86YD7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FAM90A1Q86YD7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
FAM90A1Q86YD7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.09■□□□□ 0.65
FAM90A1Q86YD7 MIR6724-1-201ENST00000616420 92 ntBASIC19.09■□□□□ 0.65
FAM90A1Q86YD7 MIR6724-2-201ENST00000616483 92 ntBASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms