Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
FOXR1Q6PIV2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FOXR1Q6PIV2 AC137767.1-201ENST00000602918 1920 ntBASIC23.61■■□□□ 1.37
FOXR1Q6PIV2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
FOXR1Q6PIV2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
FOXR1Q6PIV2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.6■■□□□ 1.37
FOXR1Q6PIV2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.6■■□□□ 1.37
FOXR1Q6PIV2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.6■■□□□ 1.37
FOXR1Q6PIV2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.6■■□□□ 1.37
FOXR1Q6PIV2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
FOXR1Q6PIV2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
FOXR1Q6PIV2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
FOXR1Q6PIV2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
FOXR1Q6PIV2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
FOXR1Q6PIV2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
FOXR1Q6PIV2 AC131212.1-201ENST00000613771 668 ntBASIC23.59■■□□□ 1.37
FOXR1Q6PIV2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
FOXR1Q6PIV2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
FOXR1Q6PIV2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.59■■□□□ 1.37
FOXR1Q6PIV2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.59■■□□□ 1.37
FOXR1Q6PIV2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
FOXR1Q6PIV2 LINC00526-201ENST00000581067 1875 ntBASIC23.58■■□□□ 1.37
FOXR1Q6PIV2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
FOXR1Q6PIV2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
FOXR1Q6PIV2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
FOXR1Q6PIV2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
FOXR1Q6PIV2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.58■■□□□ 1.37
FOXR1Q6PIV2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.58■■□□□ 1.37
FOXR1Q6PIV2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.58■■□□□ 1.37
FOXR1Q6PIV2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
FOXR1Q6PIV2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
FOXR1Q6PIV2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
FOXR1Q6PIV2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
FOXR1Q6PIV2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
FOXR1Q6PIV2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
FOXR1Q6PIV2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.57■■□□□ 1.36
FOXR1Q6PIV2 AC103834.1-201ENST00000520383 144 ntBASIC23.57■■□□□ 1.36
FOXR1Q6PIV2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
FOXR1Q6PIV2 PVT1_1.1-201ENST00000615125 194 ntBASIC23.57■■□□□ 1.36
FOXR1Q6PIV2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
FOXR1Q6PIV2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
FOXR1Q6PIV2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.57■■□□□ 1.36
FOXR1Q6PIV2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
FOXR1Q6PIV2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
FOXR1Q6PIV2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
FOXR1Q6PIV2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
FOXR1Q6PIV2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
FOXR1Q6PIV2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.56■■□□□ 1.36
FOXR1Q6PIV2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
FOXR1Q6PIV2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
FOXR1Q6PIV2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
FOXR1Q6PIV2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
FOXR1Q6PIV2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
FOXR1Q6PIV2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
FOXR1Q6PIV2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
FOXR1Q6PIV2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
FOXR1Q6PIV2 AL592295.1-201ENST00000400984 884 ntBASIC23.55■■□□□ 1.36
FOXR1Q6PIV2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.55■■□□□ 1.36
FOXR1Q6PIV2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.55■■□□□ 1.36
FOXR1Q6PIV2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
FOXR1Q6PIV2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
FOXR1Q6PIV2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.54■■□□□ 1.36
FOXR1Q6PIV2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.54■■□□□ 1.36
FOXR1Q6PIV2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
FOXR1Q6PIV2 AL359504.2-201ENST00000605506 1601 ntBASIC23.54■■□□□ 1.36
FOXR1Q6PIV2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
FOXR1Q6PIV2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
FOXR1Q6PIV2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.53■■□□□ 1.36
FOXR1Q6PIV2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.53■■□□□ 1.36
FOXR1Q6PIV2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
FOXR1Q6PIV2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
FOXR1Q6PIV2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
FOXR1Q6PIV2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
FOXR1Q6PIV2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
FOXR1Q6PIV2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
FOXR1Q6PIV2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.52■■□□□ 1.36
FOXR1Q6PIV2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
FOXR1Q6PIV2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
FOXR1Q6PIV2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
FOXR1Q6PIV2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
FOXR1Q6PIV2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.51■■□□□ 1.35
FOXR1Q6PIV2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
FOXR1Q6PIV2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.51■■□□□ 1.35
FOXR1Q6PIV2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.51■■□□□ 1.35
FOXR1Q6PIV2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
FOXR1Q6PIV2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
FOXR1Q6PIV2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
FOXR1Q6PIV2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
FOXR1Q6PIV2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.51■■□□□ 1.35
FOXR1Q6PIV2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.51■■□□□ 1.35
FOXR1Q6PIV2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.51■■□□□ 1.35
FOXR1Q6PIV2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
FOXR1Q6PIV2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
FOXR1Q6PIV2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.5■■□□□ 1.35
FOXR1Q6PIV2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
FOXR1Q6PIV2 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.5■■□□□ 1.35
FOXR1Q6PIV2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
FOXR1Q6PIV2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
FOXR1Q6PIV2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
FOXR1Q6PIV2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms