Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC31.44■■■□□ 2.62
COL16A1Q07092 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC31.44■■■□□ 2.62
COL16A1Q07092 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
COL16A1Q07092 MAP2K4P1-201ENST00000438453 1195 ntBASIC31.43■■■□□ 2.62
COL16A1Q07092 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC31.43■■■□□ 2.62
COL16A1Q07092 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC31.43■■■□□ 2.62
COL16A1Q07092 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
COL16A1Q07092 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
COL16A1Q07092 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
COL16A1Q07092 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
COL16A1Q07092 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
COL16A1Q07092 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC31.42■■■□□ 2.62
COL16A1Q07092 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
COL16A1Q07092 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
COL16A1Q07092 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
COL16A1Q07092 AC026185.1-201ENST00000445748 174 ntBASIC31.42■■■□□ 2.62
COL16A1Q07092 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
COL16A1Q07092 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC31.41■■■□□ 2.62
COL16A1Q07092 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC31.41■■■□□ 2.62
COL16A1Q07092 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
COL16A1Q07092 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC31.41■■■□□ 2.62
COL16A1Q07092 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
COL16A1Q07092 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
COL16A1Q07092 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC31.4■■■□□ 2.62
COL16A1Q07092 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC31.4■■■□□ 2.62
COL16A1Q07092 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
COL16A1Q07092 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
COL16A1Q07092 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
COL16A1Q07092 CROCCP5-201ENST00000436658 830 ntBASIC31.39■■■□□ 2.62
COL16A1Q07092 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC31.39■■■□□ 2.62
COL16A1Q07092 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC31.39■■■□□ 2.62
COL16A1Q07092 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
COL16A1Q07092 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC31.39■■■□□ 2.62
COL16A1Q07092 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
COL16A1Q07092 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC31.38■■■□□ 2.61
COL16A1Q07092 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC31.38■■■□□ 2.61
COL16A1Q07092 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC31.38■■■□□ 2.61
COL16A1Q07092 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC31.38■■■□□ 2.61
COL16A1Q07092 NKILA-201ENST00000613231 537 ntTSL 4 BASIC31.38■■■□□ 2.61
COL16A1Q07092 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
COL16A1Q07092 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC31.38■■■□□ 2.61
COL16A1Q07092 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
COL16A1Q07092 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
COL16A1Q07092 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
COL16A1Q07092 AL109923.1-201ENST00000618799 583 ntBASIC31.38■■■□□ 2.61
COL16A1Q07092 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC31.38■■■□□ 2.61
COL16A1Q07092 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
COL16A1Q07092 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
COL16A1Q07092 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
COL16A1Q07092 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
COL16A1Q07092 GAS2L1P2-201ENST00000436355 1356 ntBASIC31.36■■■□□ 2.61
COL16A1Q07092 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC31.36■■■□□ 2.61
COL16A1Q07092 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC31.36■■■□□ 2.61
COL16A1Q07092 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
COL16A1Q07092 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
COL16A1Q07092 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
COL16A1Q07092 VGF-203ENST00000611537 1622 ntTSL 5 BASIC31.36■■■□□ 2.61
COL16A1Q07092 LINC02228-203ENST00000641970 1355 ntBASIC31.36■■■□□ 2.61
COL16A1Q07092 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
COL16A1Q07092 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
COL16A1Q07092 AC016769.1-201ENST00000409132 1010 ntBASIC31.35■■■□□ 2.61
COL16A1Q07092 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
COL16A1Q07092 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
COL16A1Q07092 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
COL16A1Q07092 AL499627.2-201ENST00000606283 725 ntBASIC31.35■■■□□ 2.61
COL16A1Q07092 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
COL16A1Q07092 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC31.35■■■□□ 2.61
COL16A1Q07092 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
COL16A1Q07092 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
COL16A1Q07092 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC31.35■■■□□ 2.61
COL16A1Q07092 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC31.35■■■□□ 2.61
COL16A1Q07092 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
COL16A1Q07092 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
COL16A1Q07092 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC31.35■■■□□ 2.61
COL16A1Q07092 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC31.34■■■□□ 2.61
COL16A1Q07092 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC31.34■■■□□ 2.61
COL16A1Q07092 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
COL16A1Q07092 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
COL16A1Q07092 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
COL16A1Q07092 GTSE1-AS1-202ENST00000623117 1518 ntBASIC31.34■■■□□ 2.61
COL16A1Q07092 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
COL16A1Q07092 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
COL16A1Q07092 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
COL16A1Q07092 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC31.33■■■□□ 2.61
COL16A1Q07092 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC31.33■■■□□ 2.61
COL16A1Q07092 AC137761.2-201ENST00000561729 223 ntBASIC31.32■■■□□ 2.6
COL16A1Q07092 AC145350.3-201ENST00000569033 163 ntBASIC31.32■■■□□ 2.6
COL16A1Q07092 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC31.32■■■□□ 2.6
COL16A1Q07092 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
COL16A1Q07092 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
COL16A1Q07092 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC31.32■■■□□ 2.6
COL16A1Q07092 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
COL16A1Q07092 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
COL16A1Q07092 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
COL16A1Q07092 pRNA.6-201ENST00000610482 90 ntBASIC31.31■■■□□ 2.6
COL16A1Q07092 pRNA.5-201ENST00000612139 90 ntBASIC31.31■■■□□ 2.6
COL16A1Q07092 pRNA.11-201ENST00000618423 90 ntBASIC31.31■■■□□ 2.6
COL16A1Q07092 pRNA.13-201ENST00000619112 90 ntBASIC31.31■■■□□ 2.6
COL16A1Q07092 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
COL16A1Q07092 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC31.31■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms