Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 UBA3YPR066W 900 nt5.12□□□□□ -1.59
RPA49Q01080 FRE3YOR381W 2136 nt5.12□□□□□ -1.59
RPA49Q01080 DHH1YDL160C 1521 nt5.12□□□□□ -1.59
RPA49Q01080 IXR1YKL032C 1794 nt5.11□□□□□ -1.59
RPA49Q01080 ELP2YGR200C 2367 nt5.11□□□□□ -1.59
RPA49Q01080 YCR075W-AYCR075W-A 228 nt5.11□□□□□ -1.59
RPA49Q01080 ECM1YAL059W 639 nt5.11□□□□□ -1.59
RPA49Q01080 UIP3YAR027W 708 nt5.11□□□□□ -1.59
RPA49Q01080 APS1YLR170C 471 nt5.11□□□□□ -1.59
RPA49Q01080 NOP13YNL175C 1212 nt5.11□□□□□ -1.59
RPA49Q01080 TRS33YOR115C 807 nt5.11□□□□□ -1.59
RPA49Q01080 YEL053W-AYEL053W-A 348 nt5.1□□□□□ -1.59
RPA49Q01080 YMR105W-AYMR105W-A 195 nt5.1□□□□□ -1.59
RPA49Q01080 IFM1YOL023W 2031 nt5.1□□□□□ -1.59
RPA49Q01080 YBR016WYBR016W 387 nt5.1□□□□□ -1.59
RPA49Q01080 BUD7YOR299W 2241 nt5.1□□□□□ -1.59
RPA49Q01080 ARR1YPR199C 885 nt5.1□□□□□ -1.59
RPA49Q01080 SMP1YBR182C 1359 nt5.1□□□□□ -1.59
RPA49Q01080 SUM1YDR310C 3189 nt5.1□□□□□ -1.59
RPA49Q01080 PUT1YLR142W 1431 nt5.09□□□□□ -1.59
RPA49Q01080 FPK1YNR047W 2682 nt5.09□□□□□ -1.59
RPA49Q01080 YKR104WYKR104W 921 nt5.09□□□□□ -1.59
RPA49Q01080 PAU17YLL025W 375 nt5.09□□□□□ -1.59
RPA49Q01080 MRPL39YML009C 213 nt5.09□□□□□ -1.59
RPA49Q01080 DSE3YOR264W 1293 nt5.09□□□□□ -1.59
RPA49Q01080 YPL071CYPL071C 471 nt5.09□□□□□ -1.59
RPA49Q01080 DNF2YDR093W 4839 nt5.09□□□□□ -1.6
RPA49Q01080 IBA57YJR122W 1494 nt5.08□□□□□ -1.6
RPA49Q01080 YHR177WYHR177W 1362 nt5.08□□□□□ -1.6
RPA49Q01080 YDL027CYDL027C 1263 nt5.08□□□□□ -1.6
RPA49Q01080 YER147C-AYER147C-A 411 nt5.08□□□□□ -1.6
RPA49Q01080 YIL028WYIL028W 399 nt5.08□□□□□ -1.6
RPA49Q01080 MGR2YPL098C 342 nt5.08□□□□□ -1.6
RPA49Q01080 YPL191CYPL191C 1083 nt5.08□□□□□ -1.6
RPA49Q01080 MAL11YGR289C 1851 nt5.08□□□□□ -1.6
RPA49Q01080 RRP3YHR065C 1506 nt5.07□□□□□ -1.6
RPA49Q01080 APM2YHL019C 1818 nt5.07□□□□□ -1.6
RPA49Q01080 INO2YDR123C 915 nt5.07□□□□□ -1.6
RPA49Q01080 YER187WYER187W 426 nt5.07□□□□□ -1.6
RPA49Q01080 YKL169CYKL169C 384 nt5.07□□□□□ -1.6
RPA49Q01080 IMD3YLR432W 1572 nt5.07□□□□□ -1.6
RPA49Q01080 STE7YDL159W 1548 nt5.07□□□□□ -1.6
RPA49Q01080 AIM10YER087W 1731 nt5.06□□□□□ -1.6
RPA49Q01080 GRS1YBR121C 2004 nt5.06□□□□□ -1.6
RPA49Q01080 YGR153WYGR153W 654 nt5.06□□□□□ -1.6
RPA49Q01080 YNL143CYNL143C 393 nt5.06□□□□□ -1.6
RPA49Q01080 NRM1YNR009W 750 nt5.06□□□□□ -1.6
RPA49Q01080 YOR289WYOR289W 756 nt5.06□□□□□ -1.6
RPA49Q01080 snR3snR3 194 nt5.06□□□□□ -1.6
RPA49Q01080 TIP20YGL145W 2106 nt5.06□□□□□ -1.6
RPA49Q01080 MST1YKL194C 1389 nt5.05□□□□□ -1.6
RPA49Q01080 HER2YMR293C 1395 nt5.05□□□□□ -1.6
RPA49Q01080 PCL10YGL134W 1302 nt5.05□□□□□ -1.6
RPA49Q01080 SPO74YGL170C 1242 nt5.05□□□□□ -1.6
RPA49Q01080 RMI1YPL024W 726 nt5.05□□□□□ -1.6
RPA49Q01080 YPR169W-AYPR169W-A 219 nt5.05□□□□□ -1.6
RPA49Q01080 YPR170W-BYPR170W-B 258 nt5.05□□□□□ -1.6
RPA49Q01080 CTF18YMR078C 2226 nt5.05□□□□□ -1.6
RPA49Q01080 PRM1YNL279W 1986 nt5.04□□□□□ -1.6
RPA49Q01080 YDR445CYDR445C 408 nt5.04□□□□□ -1.6
RPA49Q01080 CAB1YDR531W 1104 nt5.04□□□□□ -1.6
RPA49Q01080 YEL067CYEL067C 588 nt5.04□□□□□ -1.6
RPA49Q01080 MAD2YJL030W 591 nt5.04□□□□□ -1.6
RPA49Q01080 RPL43BYJR094W-A 279 nt5.04□□□□□ -1.6
RPA49Q01080 NTR2YKR022C 969 nt5.04□□□□□ -1.6
RPA49Q01080 YAR019W-AYAR019W-A 333 nt5.04□□□□□ -1.6
RPA49Q01080 YIF1YNL263C 945 nt5.04□□□□□ -1.6
RPA49Q01080 YCL012CYCL012C 405 nt5.04□□□□□ -1.6
RPA49Q01080 RAD53YPL153C 2466 nt5.04□□□□□ -1.6
RPA49Q01080 OMS1YDR316W 1416 nt5.04□□□□□ -1.6
RPA49Q01080 HXT5YHR096C 1779 nt5.04□□□□□ -1.6
RPA49Q01080 BUD14YAR014C 2130 nt5.03□□□□□ -1.6
RPA49Q01080 YFR034W-AYFR034W-A 288 nt5.03□□□□□ -1.6
RPA49Q01080 YKR075CYKR075C 924 nt5.03□□□□□ -1.6
RPA49Q01080 snR32snR32 188 nt5.03□□□□□ -1.6
RPA49Q01080 MAL13YGR288W 1422 nt5.03□□□□□ -1.6
RPA49Q01080 LAS21YJL062W 2493 nt5.03□□□□□ -1.6
RPA49Q01080 VPS36YLR417W 1701 nt5.03□□□□□ -1.6
RPA49Q01080 GMC1YDR506C 1827 nt5.02□□□□□ -1.61
RPA49Q01080 KCH1YJR054W 1494 nt5.02□□□□□ -1.61
RPA49Q01080 PCL8YPL219W 1479 nt5.02□□□□□ -1.61
RPA49Q01080 UBP9YER098W 2265 nt5.02□□□□□ -1.61
RPA49Q01080 SPC34YKR037C 888 nt5.02□□□□□ -1.61
RPA49Q01080 YLL017WYLL017W 312 nt5.02□□□□□ -1.61
RPA49Q01080 RAD30YDR419W 1899 nt5.02□□□□□ -1.61
RPA49Q01080 KAR2YJL034W 2049 nt5.02□□□□□ -1.61
RPA49Q01080 SWI3YJL176C 2478 nt5.02□□□□□ -1.61
RPA49Q01080 PAL1YDR348C 1500 nt5.02□□□□□ -1.61
RPA49Q01080 ATM1YMR301C 2073 nt5.01□□□□□ -1.61
RPA49Q01080 HIR2YOR038C 2628 nt5.01□□□□□ -1.61
RPA49Q01080 SVF1YDR346C 1446 nt5.01□□□□□ -1.61
RPA49Q01080 LUC7YDL087C 786 nt5.01□□□□□ -1.61
RPA49Q01080 PHM8YER037W 966 nt5.01□□□□□ -1.61
RPA49Q01080 YKL023WYKL023W 834 nt5.01□□□□□ -1.61
RPA49Q01080 PPA2YMR267W 933 nt5.01□□□□□ -1.61
RPA49Q01080 MCM4YPR019W 2802 nt5.01□□□□□ -1.61
RPA49Q01080 FUM1YPL262W 1467 nt5□□□□□ -1.61
RPA49Q01080 SET4YJL105W 1683 nt5□□□□□ -1.61
RPA49Q01080 AUA1YFL010W-A 285 nt5□□□□□ -1.61
RPA49Q01080 GRE3YHR104W 984 nt5□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms