Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.62■□□□□ 0.89
RPS4XP62701 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RPS4XP62701 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
RPS4XP62701 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RPS4XP62701 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RPS4XP62701 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.61■□□□□ 0.89
RPS4XP62701 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RPS4XP62701 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPS4XP62701 AC012676.1-201ENST00000574705 1949 ntBASIC20.61■□□□□ 0.89
RPS4XP62701 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RPS4XP62701 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RPS4XP62701 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPS4XP62701 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RPS4XP62701 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RPS4XP62701 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.6■□□□□ 0.89
RPS4XP62701 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.6■□□□□ 0.89
RPS4XP62701 AC120024.1-201ENST00000562672 995 ntBASIC20.6■□□□□ 0.89
RPS4XP62701 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPS4XP62701 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.59■□□□□ 0.89
RPS4XP62701 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPS4XP62701 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RPS4XP62701 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.59■□□□□ 0.89
RPS4XP62701 AC239859.2-201ENST00000444165 318 ntBASIC20.59■□□□□ 0.89
RPS4XP62701 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.59■□□□□ 0.89
RPS4XP62701 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RPS4XP62701 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
RPS4XP62701 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
RPS4XP62701 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPS4XP62701 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.58■□□□□ 0.89
RPS4XP62701 AL356441.2-201ENST00000443009 864 ntBASIC20.58■□□□□ 0.89
RPS4XP62701 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.58■□□□□ 0.89
RPS4XP62701 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.58■□□□□ 0.89
RPS4XP62701 Z92544.1-202ENST00000571933 1220 ntBASIC20.58■□□□□ 0.89
RPS4XP62701 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPS4XP62701 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPS4XP62701 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
RPS4XP62701 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RPS4XP62701 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.57■□□□□ 0.88
RPS4XP62701 AC133561.1-201ENST00000568600 2415 ntBASIC20.57■□□□□ 0.88
RPS4XP62701 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPS4XP62701 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPS4XP62701 KRT18P24-201ENST00000344739 1156 ntBASIC20.57■□□□□ 0.88
RPS4XP62701 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RPS4XP62701 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.57■□□□□ 0.88
RPS4XP62701 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPS4XP62701 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPS4XP62701 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPS4XP62701 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RPS4XP62701 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPS4XP62701 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPS4XP62701 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPS4XP62701 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.56■□□□□ 0.88
RPS4XP62701 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPS4XP62701 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.56■□□□□ 0.88
RPS4XP62701 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPS4XP62701 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPS4XP62701 ANOS2P-203ENST00000472227 1816 ntBASIC20.55■□□□□ 0.88
RPS4XP62701 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.55■□□□□ 0.88
RPS4XP62701 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPS4XP62701 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.55■□□□□ 0.88
RPS4XP62701 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.55■□□□□ 0.88
RPS4XP62701 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.55■□□□□ 0.88
RPS4XP62701 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPS4XP62701 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPS4XP62701 AF131216.4-201ENST00000638924 1588 ntBASIC20.55■□□□□ 0.88
RPS4XP62701 ALDH1A3-203ENST00000557963 1670 ntBASIC20.54■□□□□ 0.88
RPS4XP62701 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.54■□□□□ 0.88
RPS4XP62701 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPS4XP62701 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPS4XP62701 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.54■□□□□ 0.88
RPS4XP62701 AC092068.2-201ENST00000590491 1708 ntBASIC20.54■□□□□ 0.88
RPS4XP62701 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.54■□□□□ 0.88
RPS4XP62701 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPS4XP62701 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPS4XP62701 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.54■□□□□ 0.88
RPS4XP62701 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.54■□□□□ 0.88
RPS4XP62701 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPS4XP62701 MIR4281-201ENST00000580852 62 ntBASIC20.54■□□□□ 0.88
RPS4XP62701 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPS4XP62701 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.54■□□□□ 0.88
RPS4XP62701 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.54■□□□□ 0.88
RPS4XP62701 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.54■□□□□ 0.88
RPS4XP62701 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPS4XP62701 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.54■□□□□ 0.88
RPS4XP62701 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.54■□□□□ 0.88
RPS4XP62701 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RPS4XP62701 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS4XP62701 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.53■□□□□ 0.88
RPS4XP62701 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPS4XP62701 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS4XP62701 KRT125P-201ENST00000546827 989 ntBASIC20.53■□□□□ 0.88
RPS4XP62701 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.53■□□□□ 0.88
RPS4XP62701 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RPS4XP62701 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.53■□□□□ 0.88
RPS4XP62701 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RPS4XP62701 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RPS4XP62701 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RPS4XP62701 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RPS4XP62701 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RPS4XP62701 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms