Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 CDC19YAL038W 1503 nt6.66□□□□□ -1.34
UFD2P54860 YDR220CYDR220C 294 nt6.66□□□□□ -1.34
UFD2P54860 PEF1YGR058W 1008 nt6.66□□□□□ -1.34
UFD2P54860 YIL152WYIL152W 708 nt6.66□□□□□ -1.34
UFD2P54860 YJL156W-AYJL156W-A 222 nt6.66□□□□□ -1.34
UFD2P54860 MTC2YKL098W 1074 nt6.66□□□□□ -1.34
UFD2P54860 YLR049CYLR049C 1287 nt6.66□□□□□ -1.34
UFD2P54860 POP8YBL018C 402 nt6.66□□□□□ -1.34
UFD2P54860 YML101C-AYML101C-A 318 nt6.66□□□□□ -1.34
UFD2P54860 RPL3YOR063W 1164 nt6.66□□□□□ -1.34
UFD2P54860 YBR013CYBR013C 390 nt6.66□□□□□ -1.34
UFD2P54860 YPR071WYPR071W 636 nt6.66□□□□□ -1.34
UFD2P54860 YPR123CYPR123C 435 nt6.66□□□□□ -1.34
UFD2P54860 SRP101YDR292C 1866 nt6.66□□□□□ -1.34
UFD2P54860 QRI1YDL103C 1434 nt6.66□□□□□ -1.34
UFD2P54860 CYC8YBR112C 2901 nt6.65□□□□□ -1.34
UFD2P54860 YDL119CYDL119C 924 nt6.65□□□□□ -1.34
UFD2P54860 CIS3YJL158C 684 nt6.65□□□□□ -1.34
UFD2P54860 CBF1YJR060W 1056 nt6.65□□□□□ -1.34
UFD2P54860 YKL071WYKL071W 771 nt6.65□□□□□ -1.34
UFD2P54860 YMR181CYMR181C 465 nt6.65□□□□□ -1.34
UFD2P54860 PKC1YBL105C 3456 nt6.64□□□□□ -1.35
UFD2P54860 DAL4YIR028W 1908 nt6.64□□□□□ -1.35
UFD2P54860 AMD1YML035C 2433 nt6.64□□□□□ -1.35
UFD2P54860 YCR047W-AYCR047W-A 207 nt6.64□□□□□ -1.35
UFD2P54860 HMRA1YCR097W 381 nt6.64□□□□□ -1.35
UFD2P54860 BUD30YDL151C 582 nt6.64□□□□□ -1.35
UFD2P54860 CIA2YHR122W 696 nt6.64□□□□□ -1.35
UFD2P54860 MRS1YIR021W 1092 nt6.64□□□□□ -1.35
UFD2P54860 NPA3YJR072C 1158 nt6.64□□□□□ -1.35
UFD2P54860 ICT1YLR099C 1185 nt6.64□□□□□ -1.35
UFD2P54860 GPN3YLR243W 819 nt6.64□□□□□ -1.35
UFD2P54860 UTP7YER082C 1665 nt6.64□□□□□ -1.35
UFD2P54860 IMA5YJL216C 1746 nt6.64□□□□□ -1.35
UFD2P54860 YCR024C-BYCR024C-B 267 nt6.63□□□□□ -1.35
UFD2P54860 GPM2YDL021W 936 nt6.63□□□□□ -1.35
UFD2P54860 LDB17YDL146W 1476 nt6.63□□□□□ -1.35
UFD2P54860 HEM3YDL205C 984 nt6.63□□□□□ -1.35
UFD2P54860 YDR098C-AYDR098C-A 1323 nt6.63□□□□□ -1.35
UFD2P54860 YDR210C-CYDR210C-C 1323 nt6.63□□□□□ -1.35
UFD2P54860 YDR261C-CYDR261C-C 1323 nt6.63□□□□□ -1.35
UFD2P54860 YDR316W-AYDR316W-A 1323 nt6.63□□□□□ -1.35
UFD2P54860 YDR365W-AYDR365W-A 1323 nt6.63□□□□□ -1.35
UFD2P54860 YER137C-AYER137C-A 1323 nt6.63□□□□□ -1.35
UFD2P54860 YER159C-AYER159C-A 1323 nt6.63□□□□□ -1.35
UFD2P54860 YGR027W-AYGR027W-A 1323 nt6.63□□□□□ -1.35
UFD2P54860 YGR038C-AYGR038C-A 1323 nt6.63□□□□□ -1.35
UFD2P54860 RME1YGR044C 903 nt6.63□□□□□ -1.35
UFD2P54860 YGR161C-CYGR161C-C 1323 nt6.63□□□□□ -1.35
UFD2P54860 YJR026WYJR026W 1323 nt6.63□□□□□ -1.35
UFD2P54860 YJR028WYJR028W 1323 nt6.63□□□□□ -1.35
UFD2P54860 IXR1YKL032C 1794 nt6.63□□□□□ -1.35
UFD2P54860 NSE1YLR007W 1011 nt6.63□□□□□ -1.35
UFD2P54860 YAR010CYAR010C 1323 nt6.63□□□□□ -1.35
UFD2P54860 YLR157C-AYLR157C-A 1323 nt6.63□□□□□ -1.35
UFD2P54860 YLR227W-AYLR227W-A 1323 nt6.63□□□□□ -1.35
UFD2P54860 YLR256W-AYLR256W-A 1323 nt6.63□□□□□ -1.35
UFD2P54860 CDC73YLR418C 1182 nt6.63□□□□□ -1.35
UFD2P54860 GAB1YLR459W 1185 nt6.63□□□□□ -1.35
UFD2P54860 YML040WYML040W 1323 nt6.63□□□□□ -1.35
UFD2P54860 YML045W-AYML045W-A 1323 nt6.63□□□□□ -1.35
UFD2P54860 YMR051CYMR051C 1323 nt6.63□□□□□ -1.35
UFD2P54860 YNL054W-AYNL054W-A 1323 nt6.63□□□□□ -1.35
UFD2P54860 MRPL22YNL177C 930 nt6.63□□□□□ -1.35
UFD2P54860 YOL103W-AYOL103W-A 1323 nt6.63□□□□□ -1.35
UFD2P54860 YPL257W-AYPL257W-A 1323 nt6.63□□□□□ -1.35
UFD2P54860 YPR137C-AYPR137C-A 1323 nt6.63□□□□□ -1.35
UFD2P54860 LOA1YPR139C 903 nt6.63□□□□□ -1.35
UFD2P54860 YPR142CYPR142C 564 nt6.63□□□□□ -1.35
UFD2P54860 YPR158C-CYPR158C-C 1323 nt6.63□□□□□ -1.35
UFD2P54860 snR82snR82 268 nt6.62□□□□□ -1.35
UFD2P54860 SEC20YDR498C 1152 nt6.62□□□□□ -1.35
UFD2P54860 QCR6YFR033C 444 nt6.62□□□□□ -1.35
UFD2P54860 CBP4YGR174C 513 nt6.62□□□□□ -1.35
UFD2P54860 YGR270C-AYGR270C-A 219 nt6.62□□□□□ -1.35
UFD2P54860 PAN6YIL145C 930 nt6.62□□□□□ -1.35
UFD2P54860 APS3YJL024C 585 nt6.62□□□□□ -1.35
UFD2P54860 PRM9YAR031W 897 nt6.62□□□□□ -1.35
UFD2P54860 YLR407WYLR407W 687 nt6.62□□□□□ -1.35
UFD2P54860 IAH1YOR126C 717 nt6.62□□□□□ -1.35
UFD2P54860 RPB8YOR224C 441 nt6.62□□□□□ -1.35
UFD2P54860 ATP20YPR020W 348 nt6.62□□□□□ -1.35
UFD2P54860 STE50YCL032W 1041 nt6.62□□□□□ -1.35
UFD2P54860 YPK2YMR104C 2034 nt6.62□□□□□ -1.35
UFD2P54860 RGD1YBR260C 2001 nt6.62□□□□□ -1.35
UFD2P54860 CSC1YLR241W 2349 nt6.61□□□□□ -1.35
UFD2P54860 YML082WYML082W 1950 nt6.61□□□□□ -1.35
UFD2P54860 XBP1YIL101C 1944 nt6.61□□□□□ -1.35
UFD2P54860 YCL065WYCL065W 369 nt6.61□□□□□ -1.35
UFD2P54860 ATO3YDR384C 828 nt6.61□□□□□ -1.35
UFD2P54860 PPM1YDR435C 987 nt6.61□□□□□ -1.35
UFD2P54860 RPR2YIR015W 435 nt6.61□□□□□ -1.35
UFD2P54860 CDC8YJR057W 651 nt6.61□□□□□ -1.35
UFD2P54860 PER33YLR064W 822 nt6.61□□□□□ -1.35
UFD2P54860 YMR155WYMR155W 1644 nt6.61□□□□□ -1.35
UFD2P54860 DIA3YDL024C 1407 nt6.6□□□□□ -1.35
UFD2P54860 MSS2YDL107W 1056 nt6.6□□□□□ -1.35
UFD2P54860 YRA1YDR381W 681 nt6.6□□□□□ -1.35
UFD2P54860 YGL230CYGL230C 444 nt6.6□□□□□ -1.35
UFD2P54860 YGR022CYGR022C 330 nt6.6□□□□□ -1.35
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms