Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 ATM1YMR301C 2073 nt4.8□□□□□ -1.64
YNL040WP53960 ASK10YGR097W 3441 nt4.79□□□□□ -1.64
YNL040WP53960 HIR2YOR038C 2628 nt4.79□□□□□ -1.64
YNL040WP53960 LPL1YOR059C 1353 nt4.79□□□□□ -1.64
YNL040WP53960 RCK2YLR248W 1833 nt4.79□□□□□ -1.64
YNL040WP53960 PEX19YDL065C 1029 nt4.79□□□□□ -1.64
YNL040WP53960 SAP30YMR263W 606 nt4.79□□□□□ -1.64
YNL040WP53960 MDR1YGR100W 2853 nt4.79□□□□□ -1.64
YNL040WP53960 YEF1YEL041W 1488 nt4.79□□□□□ -1.64
YNL040WP53960 TAF5YBR198C 2397 nt4.79□□□□□ -1.64
YNL040WP53960 NSI1YDR026C 1713 nt4.78□□□□□ -1.64
YNL040WP53960 TOS3YGL179C 1683 nt4.78□□□□□ -1.64
YNL040WP53960 RCL1YOL010W 1104 nt4.78□□□□□ -1.64
YNL040WP53960 YBR126W-AYBR126W-A 207 nt4.78□□□□□ -1.64
YNL040WP53960 KGD1YIL125W 3045 nt4.78□□□□□ -1.64
YNL040WP53960 VHC1YBR235W 3363 nt4.78□□□□□ -1.64
YNL040WP53960 ADK2YER170W 678 nt4.77□□□□□ -1.65
YNL040WP53960 GPP1YIL053W 753 nt4.77□□□□□ -1.65
YNL040WP53960 NMA1YLR328W 1206 nt4.77□□□□□ -1.65
YNL040WP53960 ECM2YBR065C 1095 nt4.77□□□□□ -1.65
YNL040WP53960 ARC40YBR234C 1155 nt4.77□□□□□ -1.65
YNL040WP53960 AKL1YBR059C 3327 nt4.77□□□□□ -1.65
YNL040WP53960 YLH47YPR125W 1365 nt4.77□□□□□ -1.65
YNL040WP53960 ARF2YDL137W 546 nt4.76□□□□□ -1.65
YNL040WP53960 TYW3YGL050W 822 nt4.76□□□□□ -1.65
YNL040WP53960 YJR012CYJR012C 624 nt4.76□□□□□ -1.65
YNL040WP53960 UMP1YBR173C 447 nt4.76□□□□□ -1.65
YNL040WP53960 YGR066CYGR066C 879 nt4.75□□□□□ -1.65
YNL040WP53960 CBT1YKL208W 816 nt4.75□□□□□ -1.65
YNL040WP53960 SPC97YHR172W 2472 nt4.75□□□□□ -1.65
YNL040WP53960 RAD28YDR030C 1521 nt4.75□□□□□ -1.65
YNL040WP53960 SFI1YLL003W 2841 nt4.75□□□□□ -1.65
YNL040WP53960 HSP82YPL240C 2130 nt4.75□□□□□ -1.65
YNL040WP53960 YDR261C-DYDR261C-D 4815 nt4.75□□□□□ -1.65
YNL040WP53960 PSE1YMR308C 3270 nt4.75□□□□□ -1.65
YNL040WP53960 ZPR1YGR211W 1461 nt4.75□□□□□ -1.65
YNL040WP53960 TUL1YKL034W 2277 nt4.74□□□□□ -1.65
YNL040WP53960 HSP31YDR533C 714 nt4.74□□□□□ -1.65
YNL040WP53960 SCS2YER120W 735 nt4.74□□□□□ -1.65
YNL040WP53960 YLF2YHL014C 1218 nt4.74□□□□□ -1.65
YNL040WP53960 PAH1YMR165C 2589 nt4.74□□□□□ -1.65
YNL040WP53960 PRP43YGL120C 2304 nt4.74□□□□□ -1.65
YNL040WP53960 CBF5YLR175W 1452 nt4.74□□□□□ -1.65
YNL040WP53960 MAG2YLR427W 2013 nt4.73□□□□□ -1.65
YNL040WP53960 CTT1YGR088W 1689 nt4.73□□□□□ -1.65
YNL040WP53960 WTM2YOR229W 1404 nt4.73□□□□□ -1.65
YNL040WP53960 EGT2YNL327W 3126 nt4.73□□□□□ -1.65
YNL040WP53960 TVP38YKR088C 1014 nt4.73□□□□□ -1.65
YNL040WP53960 YNL194CYNL194C 906 nt4.73□□□□□ -1.65
YNL040WP53960 LAS21YJL062W 2493 nt4.73□□□□□ -1.65
YNL040WP53960 PRD1YCL057W 2139 nt4.73□□□□□ -1.65
YNL040WP53960 TDA6YPR157W 1404 nt4.72□□□□□ -1.65
YNL040WP53960 CTS2YDR371W 1536 nt4.72□□□□□ -1.65
YNL040WP53960 URA7YBL039C 1740 nt4.72□□□□□ -1.65
YNL040WP53960 YDL012CYDL012C 324 nt4.72□□□□□ -1.65
YNL040WP53960 SNA2YDR525W-A 240 nt4.72□□□□□ -1.65
YNL040WP53960 PAD1YDR538W 729 nt4.72□□□□□ -1.65
YNL040WP53960 YEL009C-AYEL009C-A 408 nt4.72□□□□□ -1.65
YNL040WP53960 PDR15YDR406W 4590 nt4.72□□□□□ -1.65
YNL040WP53960 SAP4YGL229C 2457 nt4.71□□□□□ -1.65
YNL040WP53960 ARG82YDR173C 1068 nt4.71□□□□□ -1.66
YNL040WP53960 TFB3YDR460W 966 nt4.71□□□□□ -1.66
YNL040WP53960 RPL34AYER056C-A 366 nt4.71□□□□□ -1.66
YNL040WP53960 YJL215CYJL215C 360 nt4.71□□□□□ -1.66
YNL040WP53960 HAL1YPR005C 885 nt4.71□□□□□ -1.66
YNL040WP53960 OLE1YGL055W 1533 nt4.71□□□□□ -1.66
YNL040WP53960 PTR2YKR093W 1806 nt4.7□□□□□ -1.66
YNL040WP53960 HNT2YDR305C 654 nt4.7□□□□□ -1.66
YNL040WP53960 YDR545C-AYDR545C-A 480 nt4.7□□□□□ -1.66
YNL040WP53960 YEL077W-AYEL077W-A 483 nt4.7□□□□□ -1.66
YNL040WP53960 YER190C-BYER190C-B 483 nt4.7□□□□□ -1.66
YNL040WP53960 YFL068WYFL068W 483 nt4.7□□□□□ -1.66
YNL040WP53960 NAT2YGR147C 867 nt4.7□□□□□ -1.66
YNL040WP53960 YGR296C-BYGR296C-B 483 nt4.7□□□□□ -1.66
YNL040WP53960 YHL050W-AYHL050W-A 483 nt4.7□□□□□ -1.66
YNL040WP53960 YHR140WYHR140W 720 nt4.7□□□□□ -1.66
YNL040WP53960 YHR219C-AYHR219C-A 483 nt4.7□□□□□ -1.66
YNL040WP53960 CSM2YIL132C 642 nt4.7□□□□□ -1.66
YNL040WP53960 YIL177W-AYIL177W-A 483 nt4.7□□□□□ -1.66
YNL040WP53960 YJL225W-AYJL225W-A 483 nt4.7□□□□□ -1.66
YNL040WP53960 YLL066W-AYLL066W-A 483 nt4.7□□□□□ -1.66
YNL040WP53960 YLL067W-AYLL067W-A 483 nt4.7□□□□□ -1.66
YNL040WP53960 YLR466C-AYLR466C-A 483 nt4.7□□□□□ -1.66
YNL040WP53960 YLR467C-AYLR467C-A 483 nt4.7□□□□□ -1.66
YNL040WP53960 YML133W-BYML133W-B 483 nt4.7□□□□□ -1.66
YNL040WP53960 YNL339W-BYNL339W-B 483 nt4.7□□□□□ -1.66
YNL040WP53960 YBL113W-AYBL113W-A 483 nt4.7□□□□□ -1.66
YNL040WP53960 NPT1YOR209C 1290 nt4.7□□□□□ -1.66
YNL040WP53960 YOR396C-AYOR396C-A 483 nt4.7□□□□□ -1.66
YNL040WP53960 YPL283W-BYPL283W-B 483 nt4.7□□□□□ -1.66
YNL040WP53960 YPR204C-AYPR204C-A 483 nt4.7□□□□□ -1.66
YNL040WP53960 ALG6YOR002W 1635 nt4.7□□□□□ -1.66
YNL040WP53960 TSL1YML100W 3297 nt4.7□□□□□ -1.66
YNL040WP53960 YER158CYER158C 1722 nt4.69□□□□□ -1.66
YNL040WP53960 PEX7YDR142C 1128 nt4.69□□□□□ -1.66
YNL040WP53960 AI5_BETAQ0075 1065 nt4.69□□□□□ -1.66
YNL040WP53960 tK(CUU)CtK(CUU)C 73 nt4.69□□□□□ -1.66
YNL040WP53960 tK(CUU)D1tK(CUU)D1 73 nt4.69□□□□□ -1.66
YNL040WP53960 tK(CUU)D2tK(CUU)D2 73 nt4.69□□□□□ -1.66
YNL040WP53960 tK(CUU)E1tK(CUU)E1 73 nt4.69□□□□□ -1.66
Retrieved 100 of 7,029 protein–RNA pairs in 16.8 ms