Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC091060.1-201ENST00000623524 1766 ntBASIC20.01■□□□□ 0.79
HCFC1P51610 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.01■□□□□ 0.79
HCFC1P51610 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HCFC1P51610 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HCFC1P51610 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.01■□□□□ 0.79
HCFC1P51610 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.01■□□□□ 0.79
HCFC1P51610 AC006455.2-201ENST00000429931 906 ntBASIC20.01■□□□□ 0.79
HCFC1P51610 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HCFC1P51610 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.01■□□□□ 0.79
HCFC1P51610 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HCFC1P51610 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.01■□□□□ 0.79
HCFC1P51610 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HCFC1P51610 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HCFC1P51610 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20■□□□□ 0.79
HCFC1P51610 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HCFC1P51610 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HCFC1P51610 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HCFC1P51610 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HCFC1P51610 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
HCFC1P51610 IKBKGP1-201ENST00000612193 1073 ntBASIC20■□□□□ 0.79
HCFC1P51610 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HCFC1P51610 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.99■□□□□ 0.79
HCFC1P51610 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HCFC1P51610 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.99■□□□□ 0.79
HCFC1P51610 AC090192.1-201ENST00000517740 490 ntBASIC19.99■□□□□ 0.79
HCFC1P51610 AC241377.3-202ENST00000626088 1088 ntBASIC19.99■□□□□ 0.79
HCFC1P51610 AC241585.3-202ENST00000628937 1088 ntBASIC19.99■□□□□ 0.79
HCFC1P51610 AC245100.8-202ENST00000629247 1058 ntBASIC19.99■□□□□ 0.79
HCFC1P51610 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HCFC1P51610 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HCFC1P51610 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HCFC1P51610 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HCFC1P51610 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.98■□□□□ 0.79
HCFC1P51610 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HCFC1P51610 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
HCFC1P51610 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HCFC1P51610 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HCFC1P51610 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HCFC1P51610 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.98■□□□□ 0.79
HCFC1P51610 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HCFC1P51610 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HCFC1P51610 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HCFC1P51610 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.97■□□□□ 0.79
HCFC1P51610 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.97■□□□□ 0.79
HCFC1P51610 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.97■□□□□ 0.79
HCFC1P51610 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HCFC1P51610 AC020928.2-201ENST00000588717 2197 ntBASIC19.97■□□□□ 0.79
HCFC1P51610 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HCFC1P51610 AC136469.2-201ENST00000623944 1028 ntBASIC19.97■□□□□ 0.79
HCFC1P51610 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.97■□□□□ 0.79
HCFC1P51610 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
HCFC1P51610 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.96■□□□□ 0.79
HCFC1P51610 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
HCFC1P51610 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HCFC1P51610 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HCFC1P51610 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HCFC1P51610 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.96■□□□□ 0.79
HCFC1P51610 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.96■□□□□ 0.79
HCFC1P51610 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HCFC1P51610 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HCFC1P51610 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HCFC1P51610 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.96■□□□□ 0.79
HCFC1P51610 AC135731.1-201ENST00000569415 2548 ntBASIC19.96■□□□□ 0.79
HCFC1P51610 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HCFC1P51610 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
HCFC1P51610 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.95■□□□□ 0.78
HCFC1P51610 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.95■□□□□ 0.78
HCFC1P51610 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.95■□□□□ 0.78
HCFC1P51610 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HCFC1P51610 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HCFC1P51610 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.95■□□□□ 0.78
HCFC1P51610 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.95■□□□□ 0.78
HCFC1P51610 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.95■□□□□ 0.78
HCFC1P51610 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HCFC1P51610 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HCFC1P51610 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.94■□□□□ 0.78
HCFC1P51610 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.94■□□□□ 0.78
HCFC1P51610 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HCFC1P51610 AC233992.3-201ENST00000607491 485 ntBASIC19.94■□□□□ 0.78
HCFC1P51610 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HCFC1P51610 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
HCFC1P51610 SLC6A10P-202ENST00000431994 2058 ntBASIC19.94■□□□□ 0.78
HCFC1P51610 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC1P51610 BX842568.3-201ENST00000418104 571 ntBASIC19.93■□□□□ 0.78
HCFC1P51610 SLC47A1P1-202ENST00000449666 945 ntBASIC19.93■□□□□ 0.78
HCFC1P51610 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.93■□□□□ 0.78
HCFC1P51610 MIR6089-201ENST00000616698 64 ntBASIC19.93■□□□□ 0.78
HCFC1P51610 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.93■□□□□ 0.78
HCFC1P51610 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC1P51610 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC1P51610 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC1P51610 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.93■□□□□ 0.78
HCFC1P51610 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC1P51610 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HCFC1P51610 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC1P51610 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC1P51610 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC1P51610 KRT18P5-201ENST00000436075 1291 ntBASIC19.92■□□□□ 0.78
HCFC1P51610 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.92■□□□□ 0.78
HCFC1P51610 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms