Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.97■□□□□ 0.79
SOX2P48431 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SOX2P48431 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SOX2P48431 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SOX2P48431 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SOX2P48431 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
SOX2P48431 RPS2P7-201ENST00000447334 885 ntBASIC19.97■□□□□ 0.79
SOX2P48431 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SOX2P48431 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SOX2P48431 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SOX2P48431 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SOX2P48431 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SOX2P48431 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.97■□□□□ 0.79
SOX2P48431 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SOX2P48431 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.96■□□□□ 0.79
SOX2P48431 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SOX2P48431 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SOX2P48431 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SOX2P48431 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SOX2P48431 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SOX2P48431 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.96■□□□□ 0.79
SOX2P48431 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SOX2P48431 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SOX2P48431 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SOX2P48431 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.96■□□□□ 0.79
SOX2P48431 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SOX2P48431 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SOX2P48431 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SOX2P48431 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SOX2P48431 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.95■□□□□ 0.78
SOX2P48431 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SOX2P48431 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SOX2P48431 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SOX2P48431 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SOX2P48431 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SOX2P48431 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.94■□□□□ 0.78
SOX2P48431 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.94■□□□□ 0.78
SOX2P48431 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX2P48431 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX2P48431 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX2P48431 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.94■□□□□ 0.78
SOX2P48431 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.94■□□□□ 0.78
SOX2P48431 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX2P48431 C1orf229-201ENST00000623686 2258 ntBASIC19.93■□□□□ 0.78
SOX2P48431 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SOX2P48431 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX2P48431 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.93■□□□□ 0.78
SOX2P48431 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SOX2P48431 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SOX2P48431 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SOX2P48431 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.93■□□□□ 0.78
SOX2P48431 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SOX2P48431 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX2P48431 AC018755.3-202ENST00000596210 929 ntBASIC19.93■□□□□ 0.78
SOX2P48431 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SOX2P48431 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX2P48431 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SOX2P48431 EP400NL-214ENST00000641289 2402 ntBASIC19.93■□□□□ 0.78
SOX2P48431 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.93■□□□□ 0.78
SOX2P48431 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SOX2P48431 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX2P48431 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SOX2P48431 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SOX2P48431 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX2P48431 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.92■□□□□ 0.78
SOX2P48431 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX2P48431 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SOX2P48431 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SOX2P48431 AC092068.2-201ENST00000590491 1708 ntBASIC19.92■□□□□ 0.78
SOX2P48431 DUSP8P3-201ENST00000399571 1760 ntBASIC19.92■□□□□ 0.78
SOX2P48431 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.92■□□□□ 0.78
SOX2P48431 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX2P48431 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.91■□□□□ 0.78
SOX2P48431 CLDN5-201ENST00000403084 2357 ntBASIC19.91■□□□□ 0.78
SOX2P48431 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX2P48431 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX2P48431 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SOX2P48431 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
SOX2P48431 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX2P48431 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX2P48431 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX2P48431 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX2P48431 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX2P48431 SPCS2P3-201ENST00000500401 656 ntBASIC19.9■□□□□ 0.78
SOX2P48431 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SOX2P48431 MIR4449-201ENST00000578365 66 ntBASIC19.9■□□□□ 0.78
SOX2P48431 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX2P48431 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.9■□□□□ 0.78
SOX2P48431 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
SOX2P48431 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SOX2P48431 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.9■□□□□ 0.78
SOX2P48431 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX2P48431 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX2P48431 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX2P48431 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SOX2P48431 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX2P48431 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.89■□□□□ 0.77
SOX2P48431 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
SOX2P48431 AL592295.1-201ENST00000400984 884 ntBASIC19.89■□□□□ 0.77
SOX2P48431 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms