Protein–RNA interactions for Protein: P47023

TY4A-J, Transposon Ty4-J Gag polyprotein, yeastyeast

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-JP47023 YHR070C-AYHR070C-A 411 nt5.84□□□□□ -1.47
TY4A-JP47023 GRE3YHR104W 984 nt5.84□□□□□ -1.47
TY4A-JP47023 LDS1YAL018C 978 nt5.84□□□□□ -1.47
TY4A-JP47023 ELF1YKL160W 438 nt5.84□□□□□ -1.47
TY4A-JP47023 PEX27YOR193W 1131 nt5.84□□□□□ -1.47
TY4A-JP47023 MPD1YOR288C 957 nt5.84□□□□□ -1.47
TY4A-JP47023 BRF1YGR246C 1791 nt5.84□□□□□ -1.47
TY4A-JP47023 EXO1YOR033C 2109 nt5.84□□□□□ -1.47
TY4A-JP47023 UBP9YER098W 2265 nt5.83□□□□□ -1.48
TY4A-JP47023 SEO1YAL067C 1782 nt5.83□□□□□ -1.48
TY4A-JP47023 RAD57YDR004W 1383 nt5.83□□□□□ -1.48
TY4A-JP47023 YMR1YJR110W 2067 nt5.83□□□□□ -1.48
TY4A-JP47023 ELP2YGR200C 2367 nt5.83□□□□□ -1.48
TY4A-JP47023 AIM6YDL237W 1173 nt5.83□□□□□ -1.48
TY4A-JP47023 YDR124WYDR124W 975 nt5.83□□□□□ -1.48
TY4A-JP47023 PHO92YDR374C 921 nt5.83□□□□□ -1.48
TY4A-JP47023 YHR112CYHR112C 1137 nt5.83□□□□□ -1.48
TY4A-JP47023 RPF2YKR081C 1035 nt5.83□□□□□ -1.48
TY4A-JP47023 YBL077WYBL077W 432 nt5.83□□□□□ -1.48
TY4A-JP47023 RRS1YOR294W 612 nt5.83□□□□□ -1.48
TY4A-JP47023 MRPS16YPL013C 366 nt5.83□□□□□ -1.48
TY4A-JP47023 BTS1YPL069C 1008 nt5.83□□□□□ -1.48
TY4A-JP47023 SRB6YBR253W 366 nt5.83□□□□□ -1.48
TY4A-JP47023 CLN2YPL256C 1638 nt5.83□□□□□ -1.48
TY4A-JP47023 YDL109CYDL109C 1944 nt5.83□□□□□ -1.48
TY4A-JP47023 RRI1YDL216C 1323 nt5.82□□□□□ -1.48
TY4A-JP47023 YIR042CYIR042C 711 nt5.82□□□□□ -1.48
TY4A-JP47023 YLR363W-AYLR363W-A 258 nt5.82□□□□□ -1.48
TY4A-JP47023 YMR082CYMR082C 357 nt5.82□□□□□ -1.48
TY4A-JP47023 VMA4YOR332W 702 nt5.82□□□□□ -1.48
TY4A-JP47023 NRG2YBR066C 663 nt5.82□□□□□ -1.48
TY4A-JP47023 SLM4YBR077C 489 nt5.82□□□□□ -1.48
TY4A-JP47023 MPH2YDL247W 1830 nt5.82□□□□□ -1.48
TY4A-JP47023 TDA11YHR159W 1515 nt5.82□□□□□ -1.48
TY4A-JP47023 MTC1YJL123C 1437 nt5.82□□□□□ -1.48
TY4A-JP47023 FAA3YIL009W 2085 nt5.81□□□□□ -1.48
TY4A-JP47023 BUD30YDL151C 582 nt5.81□□□□□ -1.48
TY4A-JP47023 tR(ACG)DtR(ACG)D 73 nt5.81□□□□□ -1.48
TY4A-JP47023 tR(ACG)EtR(ACG)E 73 nt5.81□□□□□ -1.48
TY4A-JP47023 tR(ACG)KtR(ACG)K 73 nt5.81□□□□□ -1.48
TY4A-JP47023 tR(ACG)LtR(ACG)L 73 nt5.81□□□□□ -1.48
TY4A-JP47023 tR(ACG)OtR(ACG)O 73 nt5.81□□□□□ -1.48
TY4A-JP47023 LEU5YHR002W 1074 nt5.81□□□□□ -1.48
TY4A-JP47023 SPO7YAL009W 780 nt5.81□□□□□ -1.48
TY4A-JP47023 YKR047WYKR047W 306 nt5.81□□□□□ -1.48
TY4A-JP47023 YLR125WYLR125W 411 nt5.81□□□□□ -1.48
TY4A-JP47023 TSA1YML028W 591 nt5.81□□□□□ -1.48
TY4A-JP47023 POR1YNL055C 852 nt5.81□□□□□ -1.48
TY4A-JP47023 CUS2YNL286W 858 nt5.81□□□□□ -1.48
TY4A-JP47023 VPS70YJR126C 2436 nt5.81□□□□□ -1.48
TY4A-JP47023 HRQ1YDR291W 3234 nt5.81□□□□□ -1.48
TY4A-JP47023 YLR345WYLR345W 1530 nt5.8□□□□□ -1.48
TY4A-JP47023 EPS1YIL005W 2106 nt5.8□□□□□ -1.48
TY4A-JP47023 HIR1YBL008W 2523 nt5.8□□□□□ -1.48
TY4A-JP47023 STP4YDL048C 1473 nt5.8□□□□□ -1.48
TY4A-JP47023 YDL022C-AYDL022C-A 249 nt5.8□□□□□ -1.48
TY4A-JP47023 DFM1YDR411C 1026 nt5.8□□□□□ -1.48
TY4A-JP47023 BUD16YEL029C 939 nt5.8□□□□□ -1.48
TY4A-JP47023 TIM21YGR033C 720 nt5.8□□□□□ -1.48
TY4A-JP47023 YHR054CYHR054C 1065 nt5.8□□□□□ -1.48
TY4A-JP47023 EGD2YHR193C 525 nt5.8□□□□□ -1.48
TY4A-JP47023 ASK1YKL052C 879 nt5.8□□□□□ -1.48
TY4A-JP47023 TIS11YLR136C 858 nt5.8□□□□□ -1.48
TY4A-JP47023 PRM9YAR031W 897 nt5.8□□□□□ -1.48
TY4A-JP47023 YOL131WYOL131W 327 nt5.8□□□□□ -1.48
TY4A-JP47023 ATG29YPL166W 642 nt5.8□□□□□ -1.48
TY4A-JP47023 YPR114WYPR114W 948 nt5.8□□□□□ -1.48
TY4A-JP47023 TRE1YPL176C 2352 nt5.8□□□□□ -1.48
TY4A-JP47023 KCC4YCL024W 3114 nt5.79□□□□□ -1.48
TY4A-JP47023 TOS3YGL179C 1683 nt5.79□□□□□ -1.48
TY4A-JP47023 YDL183CYDL183C 963 nt5.79□□□□□ -1.48
TY4A-JP47023 YGL258W-AYGL258W-A 234 nt5.79□□□□□ -1.48
TY4A-JP47023 RPL10YLR075W 666 nt5.79□□□□□ -1.48
TY4A-JP47023 YMR119W-AYMR119W-A 375 nt5.79□□□□□ -1.48
TY4A-JP47023 MER1YNL210W 813 nt5.79□□□□□ -1.48
TY4A-JP47023 CSL4YNL232W 879 nt5.79□□□□□ -1.48
TY4A-JP47023 ISN1YOR155C 1353 nt5.79□□□□□ -1.48
TY4A-JP47023 RAD24YER173W 1980 nt5.78□□□□□ -1.48
TY4A-JP47023 PRP9YDL030W 1593 nt5.78□□□□□ -1.48
TY4A-JP47023 KIN28YDL108W 921 nt5.78□□□□□ -1.48
TY4A-JP47023 UGX2YDL169C 672 nt5.78□□□□□ -1.48
TY4A-JP47023 SYF2YGR129W 648 nt5.78□□□□□ -1.48
TY4A-JP47023 RPC17YJL011C 486 nt5.78□□□□□ -1.48
TY4A-JP47023 PRI2YKL045W 1587 nt5.78□□□□□ -1.48
TY4A-JP47023 TFA2YKR062W 987 nt5.78□□□□□ -1.48
TY4A-JP47023 EMG1YLR186W 759 nt5.78□□□□□ -1.48
TY4A-JP47023 CPR6YLR216C 1116 nt5.78□□□□□ -1.48
TY4A-JP47023 snR189snR189 189 nt5.78□□□□□ -1.48
TY4A-JP47023 OPY2YPR075C 1083 nt5.78□□□□□ -1.48
TY4A-JP47023 HUL4YJR036C 2679 nt5.78□□□□□ -1.48
TY4A-JP47023 TRP3YKL211C 1455 nt5.77□□□□□ -1.49
TY4A-JP47023 SKM1YOL113W 1968 nt5.77□□□□□ -1.49
TY4A-JP47023 COQ4YDR204W 1008 nt5.77□□□□□ -1.49
TY4A-JP47023 SPR28YDR218C 1272 nt5.77□□□□□ -1.49
TY4A-JP47023 CWC21YDR482C 408 nt5.77□□□□□ -1.49
TY4A-JP47023 RPN11YFR004W 921 nt5.77□□□□□ -1.49
TY4A-JP47023 PCT1YGR202C 1275 nt5.77□□□□□ -1.49
TY4A-JP47023 DID4YKL002W 699 nt5.77□□□□□ -1.49
TY4A-JP47023 NSE1YLR007W 1011 nt5.77□□□□□ -1.49
TY4A-JP47023 SPC3YLR066W 555 nt5.77□□□□□ -1.49
Retrieved 100 of 7,029 protein–RNA pairs in 10.7 ms