Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CAPN3P20807 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CAPN3P20807 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CAPN3P20807 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN3P20807 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CAPN3P20807 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN3P20807 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.88■■□□□ 1.09
CAPN3P20807 CLDN5-201ENST00000403084 2357 ntBASIC21.88■■□□□ 1.09
CAPN3P20807 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.88■■□□□ 1.09
CAPN3P20807 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN3P20807 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN3P20807 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN3P20807 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CAPN3P20807 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.87■■□□□ 1.09
CAPN3P20807 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CAPN3P20807 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CAPN3P20807 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.87■■□□□ 1.09
CAPN3P20807 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CAPN3P20807 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CAPN3P20807 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CAPN3P20807 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CAPN3P20807 EP400NL-214ENST00000641289 2402 ntBASIC21.86■■□□□ 1.09
CAPN3P20807 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CAPN3P20807 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CAPN3P20807 DUX4L18-201ENST00000553347 1267 ntBASIC21.86■■□□□ 1.09
CAPN3P20807 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CAPN3P20807 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
CAPN3P20807 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CAPN3P20807 C1orf229-201ENST00000623686 2258 ntBASIC21.86■■□□□ 1.09
CAPN3P20807 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CAPN3P20807 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CAPN3P20807 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
CAPN3P20807 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.86■■□□□ 1.09
CAPN3P20807 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN3P20807 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CAPN3P20807 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN3P20807 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN3P20807 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN3P20807 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN3P20807 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.85■■□□□ 1.09
CAPN3P20807 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN3P20807 RPS2P7-201ENST00000447334 885 ntBASIC21.85■■□□□ 1.09
CAPN3P20807 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN3P20807 AC133552.2-201ENST00000619106 1032 ntBASIC21.85■■□□□ 1.09
CAPN3P20807 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CAPN3P20807 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.85■■□□□ 1.09
CAPN3P20807 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
CAPN3P20807 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.85■■□□□ 1.09
CAPN3P20807 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN3P20807 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN3P20807 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CAPN3P20807 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN3P20807 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.84■■□□□ 1.09
CAPN3P20807 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CAPN3P20807 AC074183.2-201ENST00000623112 922 ntBASIC21.84■■□□□ 1.09
CAPN3P20807 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN3P20807 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
CAPN3P20807 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CAPN3P20807 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CAPN3P20807 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CAPN3P20807 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CAPN3P20807 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.83■■□□□ 1.09
CAPN3P20807 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CAPN3P20807 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.83■■□□□ 1.09
CAPN3P20807 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.83■■□□□ 1.09
CAPN3P20807 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CAPN3P20807 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
CAPN3P20807 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CAPN3P20807 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.82■■□□□ 1.08
CAPN3P20807 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.82■■□□□ 1.08
CAPN3P20807 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.82■■□□□ 1.08
CAPN3P20807 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN3P20807 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CAPN3P20807 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CAPN3P20807 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.82■■□□□ 1.08
CAPN3P20807 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
CAPN3P20807 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.82■■□□□ 1.08
CAPN3P20807 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN3P20807 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
CAPN3P20807 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN3P20807 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN3P20807 AL161729.1-201ENST00000604104 1402 ntBASIC21.81■■□□□ 1.08
CAPN3P20807 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.81■■□□□ 1.08
CAPN3P20807 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.81■■□□□ 1.08
CAPN3P20807 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CAPN3P20807 AL592293.1-201ENST00000502889 1188 ntBASIC21.81■■□□□ 1.08
CAPN3P20807 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CAPN3P20807 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.81■■□□□ 1.08
CAPN3P20807 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN3P20807 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN3P20807 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN3P20807 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CAPN3P20807 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN3P20807 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CAPN3P20807 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN3P20807 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.8■■□□□ 1.08
CAPN3P20807 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN3P20807 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
CAPN3P20807 SPCS2P3-201ENST00000500401 656 ntBASIC21.8■■□□□ 1.08
CAPN3P20807 AC131212.1-201ENST00000613771 668 ntBASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms