Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC31.87■■■□□ 2.69
ATF3P18847 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
ATF3P18847 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
ATF3P18847 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC31.86■■■□□ 2.69
ATF3P18847 AC012414.1-201ENST00000556676 535 ntBASIC31.86■■■□□ 2.69
ATF3P18847 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC31.86■■■□□ 2.69
ATF3P18847 VGF-203ENST00000611537 1622 ntTSL 5 BASIC31.86■■■□□ 2.69
ATF3P18847 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC31.85■■■□□ 2.69
ATF3P18847 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
ATF3P18847 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC31.85■■■□□ 2.69
ATF3P18847 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC31.85■■■□□ 2.69
ATF3P18847 MIR572-201ENST00000384983 95 ntBASIC31.85■■■□□ 2.69
ATF3P18847 pRNA.6-201ENST00000610482 90 ntBASIC31.85■■■□□ 2.69
ATF3P18847 pRNA.5-201ENST00000612139 90 ntBASIC31.85■■■□□ 2.69
ATF3P18847 pRNA.11-201ENST00000618423 90 ntBASIC31.85■■■□□ 2.69
ATF3P18847 pRNA.13-201ENST00000619112 90 ntBASIC31.85■■■□□ 2.69
ATF3P18847 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
ATF3P18847 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
ATF3P18847 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
ATF3P18847 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
ATF3P18847 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
ATF3P18847 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
ATF3P18847 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
ATF3P18847 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
ATF3P18847 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
ATF3P18847 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC31.84■■■□□ 2.69
ATF3P18847 ME3-201ENST00000323418 1068 ntTSL 5 BASIC31.84■■■□□ 2.69
ATF3P18847 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC31.84■■■□□ 2.69
ATF3P18847 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
ATF3P18847 AL354811.1-201ENST00000610286 706 ntBASIC31.84■■■□□ 2.69
ATF3P18847 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC31.84■■■□□ 2.69
ATF3P18847 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
ATF3P18847 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
ATF3P18847 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC31.83■■■□□ 2.69
ATF3P18847 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC31.83■■■□□ 2.69
ATF3P18847 KRT18P14-201ENST00000534205 1250 ntBASIC31.83■■■□□ 2.69
ATF3P18847 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
ATF3P18847 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
ATF3P18847 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.82■■■□□ 2.68
ATF3P18847 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC31.82■■■□□ 2.68
ATF3P18847 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
ATF3P18847 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC31.82■■■□□ 2.68
ATF3P18847 NKILA-201ENST00000613231 537 ntTSL 4 BASIC31.82■■■□□ 2.68
ATF3P18847 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
ATF3P18847 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
ATF3P18847 IGHV3-19-201ENST00000521488 291 ntBASIC31.81■■■□□ 2.68
ATF3P18847 TK2-208ENST00000545043 1120 ntTSL 2 BASIC31.81■■■□□ 2.68
ATF3P18847 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
ATF3P18847 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC31.8■■■□□ 2.68
ATF3P18847 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
ATF3P18847 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
ATF3P18847 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC31.8■■■□□ 2.68
ATF3P18847 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
ATF3P18847 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC31.79■■■□□ 2.68
ATF3P18847 ERN1-208ENST00000606895 2068 ntBASIC31.79■■■□□ 2.68
ATF3P18847 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC31.79■■■□□ 2.68
ATF3P18847 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC31.79■■■□□ 2.68
ATF3P18847 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC31.79■■■□□ 2.68
ATF3P18847 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
ATF3P18847 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC31.79■■■□□ 2.68
ATF3P18847 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
ATF3P18847 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
ATF3P18847 TERF1P2-201ENST00000583350 1212 ntBASIC31.78■■■□□ 2.68
ATF3P18847 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC31.78■■■□□ 2.68
ATF3P18847 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
ATF3P18847 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC31.77■■■□□ 2.68
ATF3P18847 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
ATF3P18847 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
ATF3P18847 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
ATF3P18847 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.76■■■□□ 2.68
ATF3P18847 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.76■■■□□ 2.68
ATF3P18847 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC31.76■■■□□ 2.68
ATF3P18847 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.68
ATF3P18847 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.68
ATF3P18847 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
ATF3P18847 AL022069.1-201ENST00000568025 1636 ntBASIC31.76■■■□□ 2.67
ATF3P18847 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
ATF3P18847 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC31.76■■■□□ 2.67
ATF3P18847 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC31.76■■■□□ 2.67
ATF3P18847 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
ATF3P18847 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC31.76■■■□□ 2.67
ATF3P18847 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.67
ATF3P18847 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC31.76■■■□□ 2.67
ATF3P18847 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC31.75■■■□□ 2.67
ATF3P18847 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC31.75■■■□□ 2.67
ATF3P18847 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC31.75■■■□□ 2.67
ATF3P18847 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
ATF3P18847 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
ATF3P18847 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
ATF3P18847 GTSE1-AS1-202ENST00000623117 1518 ntBASIC31.75■■■□□ 2.67
ATF3P18847 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
ATF3P18847 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC31.74■■■□□ 2.67
ATF3P18847 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
ATF3P18847 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
ATF3P18847 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC31.74■■■□□ 2.67
ATF3P18847 LINC02228-203ENST00000641970 1355 ntBASIC31.74■■■□□ 2.67
ATF3P18847 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
ATF3P18847 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
ATF3P18847 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC31.73■■■□□ 2.67
ATF3P18847 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms