Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
COL11A1P12107 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.26■■□□□ 1.8
COL11A1P12107 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.26■■□□□ 1.79
COL11A1P12107 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL11A1P12107 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.26■■□□□ 1.79
COL11A1P12107 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL11A1P12107 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26.26■■□□□ 1.79
COL11A1P12107 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
COL11A1P12107 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL11A1P12107 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.25■■□□□ 1.79
COL11A1P12107 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.25■■□□□ 1.79
COL11A1P12107 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COL11A1P12107 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.25■■□□□ 1.79
COL11A1P12107 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COL11A1P12107 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL11A1P12107 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL11A1P12107 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL11A1P12107 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL11A1P12107 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL11A1P12107 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL11A1P12107 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL11A1P12107 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.24■■□□□ 1.79
COL11A1P12107 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL11A1P12107 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL11A1P12107 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
COL11A1P12107 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
COL11A1P12107 HLA-L-211ENST00000482052 1765 ntBASIC26.24■■□□□ 1.79
COL11A1P12107 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.23■■□□□ 1.79
COL11A1P12107 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL11A1P12107 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
COL11A1P12107 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
COL11A1P12107 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
COL11A1P12107 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
COL11A1P12107 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
COL11A1P12107 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.23■■□□□ 1.79
COL11A1P12107 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.22■■□□□ 1.79
COL11A1P12107 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COL11A1P12107 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COL11A1P12107 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COL11A1P12107 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.22■■□□□ 1.79
COL11A1P12107 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
COL11A1P12107 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
COL11A1P12107 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
COL11A1P12107 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.21■■□□□ 1.79
COL11A1P12107 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.21■■□□□ 1.79
COL11A1P12107 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.21■■□□□ 1.79
COL11A1P12107 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.21■■□□□ 1.79
COL11A1P12107 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL11A1P12107 RASA4CP-201ENST00000424092 1398 ntBASIC26.21■■□□□ 1.79
COL11A1P12107 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
COL11A1P12107 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
COL11A1P12107 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
COL11A1P12107 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.21■■□□□ 1.79
COL11A1P12107 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
COL11A1P12107 AC099791.1-201ENST00000416440 715 ntBASIC26.21■■□□□ 1.79
COL11A1P12107 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.21■■□□□ 1.79
COL11A1P12107 AC027682.1-201ENST00000562846 899 ntBASIC26.21■■□□□ 1.79
COL11A1P12107 CA15P2-201ENST00000611168 834 ntBASIC26.21■■□□□ 1.79
COL11A1P12107 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
COL11A1P12107 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
COL11A1P12107 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.2■■□□□ 1.78
COL11A1P12107 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.2■■□□□ 1.78
COL11A1P12107 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
COL11A1P12107 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC26.2■■□□□ 1.78
COL11A1P12107 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL11A1P12107 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL11A1P12107 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
COL11A1P12107 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
COL11A1P12107 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.19■■□□□ 1.78
COL11A1P12107 AL138724.1-201ENST00000606771 1088 ntBASIC26.19■■□□□ 1.78
COL11A1P12107 AC241377.3-202ENST00000626088 1088 ntBASIC26.19■■□□□ 1.78
COL11A1P12107 AC241585.3-202ENST00000628937 1088 ntBASIC26.19■■□□□ 1.78
COL11A1P12107 AC245100.8-202ENST00000629247 1058 ntBASIC26.19■■□□□ 1.78
COL11A1P12107 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL11A1P12107 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL11A1P12107 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
COL11A1P12107 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.18■■□□□ 1.78
COL11A1P12107 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL11A1P12107 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL11A1P12107 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL11A1P12107 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL11A1P12107 AC022211.4-201ENST00000625094 2161 ntBASIC26.18■■□□□ 1.78
COL11A1P12107 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
COL11A1P12107 SLC47A1P1-202ENST00000449666 945 ntBASIC26.18■■□□□ 1.78
COL11A1P12107 RHOF-204ENST00000537265 699 ntTSL 2 BASIC26.18■■□□□ 1.78
COL11A1P12107 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL11A1P12107 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
COL11A1P12107 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC26.17■■□□□ 1.78
COL11A1P12107 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.17■■□□□ 1.78
COL11A1P12107 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
COL11A1P12107 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL11A1P12107 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC26.17■■□□□ 1.78
COL11A1P12107 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26.16■■□□□ 1.78
COL11A1P12107 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL11A1P12107 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.16■■□□□ 1.78
COL11A1P12107 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL11A1P12107 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL11A1P12107 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.16■■□□□ 1.78
COL11A1P12107 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC26.16■■□□□ 1.78
COL11A1P12107 AC092171.4-201ENST00000609130 632 ntBASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 375 ms