Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 SWC3YAL011W 1878 nt6.65□□□□□ -1.35
TY2B-LR1P0C2J3 IMD2YHR216W 1572 nt6.65□□□□□ -1.35
TY2B-LR1P0C2J3 CSR1YLR380W 1227 nt6.64□□□□□ -1.35
TY2B-LR1P0C2J3 RSF1YMR030W 1131 nt6.64□□□□□ -1.35
TY2B-LR1P0C2J3 CDC28YBR160W 897 nt6.64□□□□□ -1.35
TY2B-LR1P0C2J3 RNR3YIL066C 2610 nt6.64□□□□□ -1.35
TY2B-LR1P0C2J3 EFB1YAL003W 621 nt6.64□□□□□ -1.35
TY2B-LR1P0C2J3 MBR1YKL093W 1020 nt6.64□□□□□ -1.35
TY2B-LR1P0C2J3 TDA1YMR291W 1761 nt6.64□□□□□ -1.35
TY2B-LR1P0C2J3 YIL001WYIL001W 1542 nt6.63□□□□□ -1.35
TY2B-LR1P0C2J3 HMX1YLR205C 954 nt6.63□□□□□ -1.35
TY2B-LR1P0C2J3 YHR182WYHR182W 2358 nt6.63□□□□□ -1.35
TY2B-LR1P0C2J3 HXT2YMR011W 1626 nt6.63□□□□□ -1.35
TY2B-LR1P0C2J3 MSK1YNL073W 1731 nt6.63□□□□□ -1.35
TY2B-LR1P0C2J3 ABZ1YNR033W 2364 nt6.62□□□□□ -1.35
TY2B-LR1P0C2J3 KIN4YOR233W 2403 nt6.62□□□□□ -1.35
TY2B-LR1P0C2J3 SEC39YLR440C 2130 nt6.62□□□□□ -1.35
TY2B-LR1P0C2J3 YDR246W-AYDR246W-A 201 nt6.62□□□□□ -1.35
TY2B-LR1P0C2J3 RPL28YGL103W 450 nt6.62□□□□□ -1.35
TY2B-LR1P0C2J3 tQ(UUG)CtQ(UUG)C 72 nt6.62□□□□□ -1.35
TY2B-LR1P0C2J3 tQ(UUG)D1tQ(UUG)D1 72 nt6.62□□□□□ -1.35
TY2B-LR1P0C2J3 tQ(UUG)D2tQ(UUG)D2 72 nt6.62□□□□□ -1.35
TY2B-LR1P0C2J3 tQ(UUG)D3tQ(UUG)D3 72 nt6.62□□□□□ -1.35
TY2B-LR1P0C2J3 tQ(UUG)E1tQ(UUG)E1 72 nt6.62□□□□□ -1.35
TY2B-LR1P0C2J3 tQ(UUG)HtQ(UUG)H 72 nt6.62□□□□□ -1.35
TY2B-LR1P0C2J3 tQ(UUG)LtQ(UUG)L 72 nt6.62□□□□□ -1.35
TY2B-LR1P0C2J3 YHR173CYHR173C 339 nt6.62□□□□□ -1.35
TY2B-LR1P0C2J3 AIP1YMR092C 1848 nt6.62□□□□□ -1.35
TY2B-LR1P0C2J3 AAD4YDL243C 990 nt6.62□□□□□ -1.35
TY2B-LR1P0C2J3 YGL063C-AYGL063C-A 150 nt6.61□□□□□ -1.35
TY2B-LR1P0C2J3 AGA1YNR044W 2178 nt6.61□□□□□ -1.35
TY2B-LR1P0C2J3 YTA12YMR089C 2478 nt6.61□□□□□ -1.35
TY2B-LR1P0C2J3 RET3YPL010W 570 nt6.6□□□□□ -1.35
TY2B-LR1P0C2J3 FLD1YLR404W 858 nt6.59□□□□□ -1.35
TY2B-LR1P0C2J3 VPS68YOL129W 555 nt6.59□□□□□ -1.35
TY2B-LR1P0C2J3 HIS4YCL030C 2400 nt6.58□□□□□ -1.36
TY2B-LR1P0C2J3 FBP1YLR377C 1047 nt6.57□□□□□ -1.36
TY2B-LR1P0C2J3 RPL18BYNL301C 561 nt6.57□□□□□ -1.36
TY2B-LR1P0C2J3 NRD1YNL251C 1728 nt6.57□□□□□ -1.36
TY2B-LR1P0C2J3 LOH1YJL038C 660 nt6.57□□□□□ -1.36
TY2B-LR1P0C2J3 BAT2YJR148W 1131 nt6.56□□□□□ -1.36
TY2B-LR1P0C2J3 TIF34YMR146C 1044 nt6.56□□□□□ -1.36
TY2B-LR1P0C2J3 RFA2YNL312W 822 nt6.56□□□□□ -1.36
TY2B-LR1P0C2J3 MGS1YNL218W 1764 nt6.56□□□□□ -1.36
TY2B-LR1P0C2J3 PDR18YNR070W 4002 nt6.56□□□□□ -1.36
TY2B-LR1P0C2J3 UBX2YML013W 1755 nt6.55□□□□□ -1.36
TY2B-LR1P0C2J3 YHR032C-AYHR032C-A 120 nt6.55□□□□□ -1.36
TY2B-LR1P0C2J3 CYC8YBR112C 2901 nt6.55□□□□□ -1.36
TY2B-LR1P0C2J3 DAN1YJR150C 897 nt6.54□□□□□ -1.36
TY2B-LR1P0C2J3 SLX1YBR228W 915 nt6.54□□□□□ -1.36
TY2B-LR1P0C2J3 YGL072CYGL072C 360 nt6.53□□□□□ -1.36
TY2B-LR1P0C2J3 GTT2YLL060C 702 nt6.53□□□□□ -1.36
TY2B-LR1P0C2J3 TAF5YBR198C 2397 nt6.53□□□□□ -1.36
TY2B-LR1P0C2J3 ATF1YOR377W 1578 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 VID27YNL212W 2349 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 HXK2YGL253W 1461 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 STE7YDL159W 1548 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 YDR545C-AYDR545C-A 480 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 YEL077W-AYEL077W-A 483 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 YER190C-BYER190C-B 483 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 YFL068WYFL068W 483 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 NAT2YGR147C 867 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 YGR296C-BYGR296C-B 483 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 YHL050W-AYHL050W-A 483 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 YHR219C-AYHR219C-A 483 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 YIL177W-AYIL177W-A 483 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 YJL225W-AYJL225W-A 483 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 YLL066W-AYLL066W-A 483 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 YLL067W-AYLL067W-A 483 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 YLR466C-AYLR466C-A 483 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 YLR467C-AYLR467C-A 483 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 YML133W-BYML133W-B 483 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 YNL339W-BYNL339W-B 483 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 YBL113W-AYBL113W-A 483 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 YOR396C-AYOR396C-A 483 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 YPL283W-BYPL283W-B 483 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 YPR204C-AYPR204C-A 483 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 YBR219CYBR219C 384 nt6.52□□□□□ -1.37
TY2B-LR1P0C2J3 RAD16YBR114W 2373 nt6.51□□□□□ -1.37
TY2B-LR1P0C2J3 IMP1YMR150C 573 nt6.51□□□□□ -1.37
TY2B-LR1P0C2J3 HSP30YCR021C 999 nt6.5□□□□□ -1.37
TY2B-LR1P0C2J3 SGN1YIR001C 753 nt6.5□□□□□ -1.37
TY2B-LR1P0C2J3 YKL023WYKL023W 834 nt6.5□□□□□ -1.37
TY2B-LR1P0C2J3 CYM1YDR430C 2970 nt6.5□□□□□ -1.37
TY2B-LR1P0C2J3 MSW1YDR268W 1140 nt6.49□□□□□ -1.37
TY2B-LR1P0C2J3 YML031C-AYML031C-A 336 nt6.49□□□□□ -1.37
TY2B-LR1P0C2J3 YJR038CYJR038C 363 nt6.49□□□□□ -1.37
TY2B-LR1P0C2J3 YAL047W-AYAL047W-A 330 nt6.49□□□□□ -1.37
TY2B-LR1P0C2J3 MNN2YBR015C 1794 nt6.49□□□□□ -1.37
TY2B-LR1P0C2J3 NUP42YDR192C 1293 nt6.48□□□□□ -1.37
TY2B-LR1P0C2J3 EOS1YNL080C 1101 nt6.48□□□□□ -1.37
TY2B-LR1P0C2J3 AUA1YFL010W-A 285 nt6.46□□□□□ -1.37
TY2B-LR1P0C2J3 VPS69YPR087W 321 nt6.46□□□□□ -1.37
TY2B-LR1P0C2J3 MET17YLR303W 1335 nt6.46□□□□□ -1.37
TY2B-LR1P0C2J3 SLA1YBL007C 3735 nt6.46□□□□□ -1.38
TY2B-LR1P0C2J3 VAN1YML115C 1608 nt6.46□□□□□ -1.38
TY2B-LR1P0C2J3 YDR090CYDR090C 933 nt6.46□□□□□ -1.38
TY2B-LR1P0C2J3 SDS3YIL084C 984 nt6.46□□□□□ -1.38
TY2B-LR1P0C2J3 MTH1YDR277C 1302 nt6.46□□□□□ -1.38
TY2B-LR1P0C2J3 tC(GCA)BtC(GCA)B 72 nt6.45□□□□□ -1.38
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms