Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SNRPA1P09661 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
SNRPA1P09661 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
SNRPA1P09661 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SNRPA1P09661 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SNRPA1P09661 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
SNRPA1P09661 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
SNRPA1P09661 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC29.32■■■□□ 2.28
SNRPA1P09661 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
SNRPA1P09661 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
SNRPA1P09661 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC29.32■■■□□ 2.28
SNRPA1P09661 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC29.32■■■□□ 2.28
SNRPA1P09661 AL138724.1-201ENST00000606771 1088 ntBASIC29.32■■■□□ 2.28
SNRPA1P09661 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC29.32■■■□□ 2.28
SNRPA1P09661 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
SNRPA1P09661 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SNRPA1P09661 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC29.31■■■□□ 2.28
SNRPA1P09661 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC29.31■■■□□ 2.28
SNRPA1P09661 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
SNRPA1P09661 AC241377.3-202ENST00000626088 1088 ntBASIC29.31■■■□□ 2.28
SNRPA1P09661 AC241585.3-202ENST00000628937 1088 ntBASIC29.31■■■□□ 2.28
SNRPA1P09661 AC245100.8-202ENST00000629247 1058 ntBASIC29.31■■■□□ 2.28
SNRPA1P09661 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SNRPA1P09661 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
SNRPA1P09661 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
SNRPA1P09661 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
SNRPA1P09661 AC011298.3-201ENST00000615796 283 ntBASIC29.3■■■□□ 2.28
SNRPA1P09661 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SNRPA1P09661 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SNRPA1P09661 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC29.3■■■□□ 2.28
SNRPA1P09661 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC29.29■■■□□ 2.28
SNRPA1P09661 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC29.29■■■□□ 2.28
SNRPA1P09661 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SNRPA1P09661 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC29.29■■■□□ 2.28
SNRPA1P09661 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
SNRPA1P09661 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC29.28■■■□□ 2.28
SNRPA1P09661 USF2-207ENST00000595068 1612 ntTSL 5 BASIC29.28■■■□□ 2.28
SNRPA1P09661 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SNRPA1P09661 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
SNRPA1P09661 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC29.28■■■□□ 2.28
SNRPA1P09661 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC29.28■■■□□ 2.28
SNRPA1P09661 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC29.28■■■□□ 2.28
SNRPA1P09661 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
SNRPA1P09661 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SNRPA1P09661 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC29.28■■■□□ 2.28
SNRPA1P09661 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SNRPA1P09661 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SNRPA1P09661 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SNRPA1P09661 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC29.27■■■□□ 2.28
SNRPA1P09661 AC105265.2-201ENST00000467189 838 ntBASIC29.27■■■□□ 2.28
SNRPA1P09661 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC29.27■■■□□ 2.28
SNRPA1P09661 ALDH1A3-203ENST00000557963 1670 ntBASIC29.27■■■□□ 2.28
SNRPA1P09661 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC29.26■■■□□ 2.28
SNRPA1P09661 AP003733.4-201ENST00000623785 1697 ntBASIC29.26■■■□□ 2.27
SNRPA1P09661 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SNRPA1P09661 AC091305.1-201ENST00000479476 895 ntBASIC29.26■■■□□ 2.27
SNRPA1P09661 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
SNRPA1P09661 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC29.26■■■□□ 2.27
SNRPA1P09661 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
SNRPA1P09661 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SNRPA1P09661 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC29.25■■■□□ 2.27
SNRPA1P09661 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
SNRPA1P09661 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
SNRPA1P09661 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SNRPA1P09661 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC29.25■■■□□ 2.27
SNRPA1P09661 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
SNRPA1P09661 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
SNRPA1P09661 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SNRPA1P09661 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
SNRPA1P09661 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SNRPA1P09661 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SNRPA1P09661 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SNRPA1P09661 AC006455.2-201ENST00000429931 906 ntBASIC29.24■■■□□ 2.27
SNRPA1P09661 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC29.24■■■□□ 2.27
SNRPA1P09661 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC29.24■■■□□ 2.27
SNRPA1P09661 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SNRPA1P09661 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
SNRPA1P09661 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SNRPA1P09661 HES6-206ENST00000409574 738 ntTSL 2 BASIC29.23■■■□□ 2.27
SNRPA1P09661 RARRES2P6-201ENST00000567333 442 ntBASIC29.23■■■□□ 2.27
SNRPA1P09661 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
SNRPA1P09661 MAG-206ENST00000597035 542 ntTSL 4 BASIC29.23■■■□□ 2.27
SNRPA1P09661 NKILA-201ENST00000613231 537 ntTSL 4 BASIC29.23■■■□□ 2.27
SNRPA1P09661 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
SNRPA1P09661 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
SNRPA1P09661 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC29.22■■■□□ 2.27
SNRPA1P09661 LGR4-203ENST00000480977 492 ntTSL 2 BASIC29.22■■■□□ 2.27
SNRPA1P09661 VGF-203ENST00000611537 1622 ntTSL 5 BASIC29.22■■■□□ 2.27
SNRPA1P09661 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
SNRPA1P09661 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
SNRPA1P09661 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
SNRPA1P09661 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
SNRPA1P09661 EI24-204ENST00000527235 1625 ntTSL 5 BASIC29.21■■■□□ 2.27
SNRPA1P09661 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC29.21■■■□□ 2.27
SNRPA1P09661 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
SNRPA1P09661 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC29.21■■■□□ 2.27
SNRPA1P09661 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC29.21■■■□□ 2.27
SNRPA1P09661 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC29.21■■■□□ 2.27
SNRPA1P09661 CREM-210ENST00000374721 2020 ntTSL 5 BASIC29.21■■■□□ 2.27
SNRPA1P09661 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms