Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.38■□□□□ 0.85
MRPL3P09001 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRPL3P09001 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MRPL3P09001 RNF126P1-201ENST00000567452 1320 ntBASIC20.38■□□□□ 0.85
MRPL3P09001 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.38■□□□□ 0.85
MRPL3P09001 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
MRPL3P09001 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRPL3P09001 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRPL3P09001 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
MRPL3P09001 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.38■□□□□ 0.85
MRPL3P09001 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MRPL3P09001 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
MRPL3P09001 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
MRPL3P09001 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MRPL3P09001 AL592295.1-201ENST00000400984 884 ntBASIC20.37■□□□□ 0.85
MRPL3P09001 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MRPL3P09001 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.37■□□□□ 0.85
MRPL3P09001 AC233723.2-201ENST00000623798 2106 ntBASIC20.37■□□□□ 0.85
MRPL3P09001 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.37■□□□□ 0.85
MRPL3P09001 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.37■□□□□ 0.85
MRPL3P09001 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MRPL3P09001 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MRPL3P09001 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
MRPL3P09001 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
MRPL3P09001 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MRPL3P09001 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.36■□□□□ 0.85
MRPL3P09001 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.36■□□□□ 0.85
MRPL3P09001 AC087393.1-201ENST00000582896 145 ntBASIC20.36■□□□□ 0.85
MRPL3P09001 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MRPL3P09001 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.36■□□□□ 0.85
MRPL3P09001 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
MRPL3P09001 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MRPL3P09001 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MRPL3P09001 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRPL3P09001 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRPL3P09001 AL117328.2-201ENST00000624617 1940 ntBASIC20.35■□□□□ 0.85
MRPL3P09001 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRPL3P09001 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
MRPL3P09001 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.35■□□□□ 0.85
MRPL3P09001 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRPL3P09001 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRPL3P09001 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MRPL3P09001 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.35■□□□□ 0.85
MRPL3P09001 MIR6765-201ENST00000614092 87 ntBASIC20.35■□□□□ 0.85
MRPL3P09001 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
MRPL3P09001 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.35■□□□□ 0.85
MRPL3P09001 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
MRPL3P09001 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MRPL3P09001 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MRPL3P09001 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.34■□□□□ 0.85
MRPL3P09001 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MRPL3P09001 DUX4L9-201ENST00000449051 1259 ntBASIC20.34■□□□□ 0.85
MRPL3P09001 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.34■□□□□ 0.85
MRPL3P09001 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MRPL3P09001 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MRPL3P09001 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MRPL3P09001 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MRPL3P09001 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
MRPL3P09001 C1orf229-201ENST00000623686 2258 ntBASIC20.33■□□□□ 0.85
MRPL3P09001 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
MRPL3P09001 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.33■□□□□ 0.85
MRPL3P09001 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
MRPL3P09001 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
MRPL3P09001 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
MRPL3P09001 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MRPL3P09001 DUSP8P3-201ENST00000399571 1760 ntBASIC20.33■□□□□ 0.84
MRPL3P09001 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.33■□□□□ 0.84
MRPL3P09001 AC092068.2-201ENST00000590491 1708 ntBASIC20.33■□□□□ 0.84
MRPL3P09001 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.33■□□□□ 0.84
MRPL3P09001 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPL3P09001 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPL3P09001 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPL3P09001 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPL3P09001 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.32■□□□□ 0.84
MRPL3P09001 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPL3P09001 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.32■□□□□ 0.84
MRPL3P09001 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPL3P09001 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPL3P09001 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL3P09001 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL3P09001 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL3P09001 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
MRPL3P09001 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
MRPL3P09001 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
MRPL3P09001 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.31■□□□□ 0.84
MRPL3P09001 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL3P09001 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL3P09001 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL3P09001 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL3P09001 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL3P09001 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
MRPL3P09001 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.3■□□□□ 0.84
MRPL3P09001 AL161729.1-201ENST00000604104 1402 ntBASIC20.3■□□□□ 0.84
MRPL3P09001 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MRPL3P09001 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MRPL3P09001 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
MRPL3P09001 EP400NL-214ENST00000641289 2402 ntBASIC20.3■□□□□ 0.84
MRPL3P09001 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
MRPL3P09001 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.3■□□□□ 0.84
MRPL3P09001 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms