Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TGFAP01135 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TGFAP01135 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TGFAP01135 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.79■□□□□ 0.6
TGFAP01135 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.79■□□□□ 0.6
TGFAP01135 C17orf82-201ENST00000623772 1530 ntBASIC18.79■□□□□ 0.6
TGFAP01135 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TGFAP01135 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.78■□□□□ 0.6
TGFAP01135 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TGFAP01135 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TGFAP01135 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TGFAP01135 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TGFAP01135 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.78■□□□□ 0.6
TGFAP01135 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.78■□□□□ 0.6
TGFAP01135 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.78■□□□□ 0.6
TGFAP01135 AC087623.3-201ENST00000607047 1098 ntBASIC18.78■□□□□ 0.6
TGFAP01135 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TGFAP01135 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TGFAP01135 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.77■□□□□ 0.6
TGFAP01135 MIR6089-201ENST00000616698 64 ntBASIC18.77■□□□□ 0.6
TGFAP01135 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TGFAP01135 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TGFAP01135 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TGFAP01135 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TGFAP01135 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.76■□□□□ 0.59
TGFAP01135 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.76■□□□□ 0.59
TGFAP01135 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.76■□□□□ 0.59
TGFAP01135 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.76■□□□□ 0.59
TGFAP01135 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.76■□□□□ 0.59
TGFAP01135 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.76■□□□□ 0.59
TGFAP01135 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TGFAP01135 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TGFAP01135 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TGFAP01135 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TGFAP01135 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.75■□□□□ 0.59
TGFAP01135 AC009086.3-201ENST00000623486 1008 ntBASIC18.75■□□□□ 0.59
TGFAP01135 AC136469.2-201ENST00000623944 1028 ntBASIC18.75■□□□□ 0.59
TGFAP01135 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TGFAP01135 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TGFAP01135 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TGFAP01135 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.74■□□□□ 0.59
TGFAP01135 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TGFAP01135 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TGFAP01135 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TGFAP01135 AL162430.1-201ENST00000480705 870 ntBASIC18.74■□□□□ 0.59
TGFAP01135 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.74■□□□□ 0.59
TGFAP01135 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.74■□□□□ 0.59
TGFAP01135 AC233992.3-201ENST00000607491 485 ntBASIC18.74■□□□□ 0.59
TGFAP01135 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TGFAP01135 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TGFAP01135 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TGFAP01135 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TGFAP01135 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.74■□□□□ 0.59
TGFAP01135 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.74■□□□□ 0.59
TGFAP01135 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.73■□□□□ 0.59
TGFAP01135 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TGFAP01135 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TGFAP01135 AC006455.2-201ENST00000429931 906 ntBASIC18.73■□□□□ 0.59
TGFAP01135 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.73■□□□□ 0.59
TGFAP01135 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.73■□□□□ 0.59
TGFAP01135 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TGFAP01135 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.73■□□□□ 0.59
TGFAP01135 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.73■□□□□ 0.59
TGFAP01135 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TGFAP01135 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TGFAP01135 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TGFAP01135 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TGFAP01135 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TGFAP01135 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.72■□□□□ 0.59
TGFAP01135 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TGFAP01135 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TGFAP01135 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TGFAP01135 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TGFAP01135 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.71■□□□□ 0.59
TGFAP01135 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TGFAP01135 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.71■□□□□ 0.59
TGFAP01135 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.71■□□□□ 0.59
TGFAP01135 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TGFAP01135 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TGFAP01135 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TGFAP01135 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.71■□□□□ 0.59
TGFAP01135 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.71■□□□□ 0.59
TGFAP01135 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TGFAP01135 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TGFAP01135 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TGFAP01135 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.71■□□□□ 0.59
TGFAP01135 MIR3181-201ENST00000578512 73 ntBASIC18.71■□□□□ 0.59
TGFAP01135 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TGFAP01135 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TGFAP01135 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.71■□□□□ 0.59
TGFAP01135 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TGFAP01135 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TGFAP01135 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TGFAP01135 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TGFAP01135 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TGFAP01135 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TGFAP01135 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TGFAP01135 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.7■□□□□ 0.58
TGFAP01135 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TGFAP01135 BX842568.3-201ENST00000418104 571 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms