Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CCNT1O60563 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CCNT1O60563 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.93■■□□□ 1.74
CCNT1O60563 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
CCNT1O60563 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CCNT1O60563 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CCNT1O60563 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.93■■□□□ 1.74
CCNT1O60563 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CCNT1O60563 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.93■■□□□ 1.74
CCNT1O60563 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CCNT1O60563 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.93■■□□□ 1.74
CCNT1O60563 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CCNT1O60563 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CCNT1O60563 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CCNT1O60563 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CCNT1O60563 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.92■■□□□ 1.74
CCNT1O60563 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CCNT1O60563 KRT16P3-201ENST00000439127 1283 ntBASIC25.92■■□□□ 1.74
CCNT1O60563 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.92■■□□□ 1.74
CCNT1O60563 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CCNT1O60563 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CCNT1O60563 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.91■■□□□ 1.74
CCNT1O60563 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
CCNT1O60563 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.91■■□□□ 1.74
CCNT1O60563 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
CCNT1O60563 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
CCNT1O60563 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CCNT1O60563 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.91■■□□□ 1.74
CCNT1O60563 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CCNT1O60563 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CCNT1O60563 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CCNT1O60563 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.9■■□□□ 1.74
CCNT1O60563 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.9■■□□□ 1.74
CCNT1O60563 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.9■■□□□ 1.74
CCNT1O60563 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.9■■□□□ 1.74
CCNT1O60563 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CCNT1O60563 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CCNT1O60563 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
CCNT1O60563 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CCNT1O60563 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.89■■□□□ 1.74
CCNT1O60563 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CCNT1O60563 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CCNT1O60563 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
CCNT1O60563 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.89■■□□□ 1.74
CCNT1O60563 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.89■■□□□ 1.74
CCNT1O60563 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.89■■□□□ 1.74
CCNT1O60563 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.89■■□□□ 1.74
CCNT1O60563 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
CCNT1O60563 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
CCNT1O60563 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCNT1O60563 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCNT1O60563 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCNT1O60563 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
CCNT1O60563 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CCNT1O60563 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.88■■□□□ 1.73
CCNT1O60563 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.88■■□□□ 1.73
CCNT1O60563 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCNT1O60563 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CCNT1O60563 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
CCNT1O60563 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CCNT1O60563 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.87■■□□□ 1.73
CCNT1O60563 AC005703.6-201ENST00000623265 1329 ntBASIC25.87■■□□□ 1.73
CCNT1O60563 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CCNT1O60563 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.86■■□□□ 1.73
CCNT1O60563 AL356441.2-201ENST00000443009 864 ntBASIC25.86■■□□□ 1.73
CCNT1O60563 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.86■■□□□ 1.73
CCNT1O60563 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.86■■□□□ 1.73
CCNT1O60563 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
CCNT1O60563 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
CCNT1O60563 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.85■■□□□ 1.73
CCNT1O60563 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCNT1O60563 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CCNT1O60563 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.85■■□□□ 1.73
CCNT1O60563 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCNT1O60563 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCNT1O60563 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.85■■□□□ 1.73
CCNT1O60563 MIR6724-1-201ENST00000616420 92 ntBASIC25.85■■□□□ 1.73
CCNT1O60563 MIR6724-2-201ENST00000616483 92 ntBASIC25.85■■□□□ 1.73
CCNT1O60563 MIR6724-4-201ENST00000617390 92 ntBASIC25.85■■□□□ 1.73
CCNT1O60563 MIR6724-3-201ENST00000622482 92 ntBASIC25.85■■□□□ 1.73
CCNT1O60563 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.85■■□□□ 1.73
CCNT1O60563 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.85■■□□□ 1.73
CCNT1O60563 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.84■■□□□ 1.73
CCNT1O60563 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.84■■□□□ 1.73
CCNT1O60563 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCNT1O60563 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.84■■□□□ 1.73
CCNT1O60563 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCNT1O60563 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCNT1O60563 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CCNT1O60563 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.83■■□□□ 1.73
CCNT1O60563 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.83■■□□□ 1.73
CCNT1O60563 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCNT1O60563 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCNT1O60563 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCNT1O60563 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCNT1O60563 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.82■■□□□ 1.72
CCNT1O60563 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CCNT1O60563 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.82■■□□□ 1.72
CCNT1O60563 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC25.82■■□□□ 1.72
CCNT1O60563 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms