Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.85■■□□□ 1.09
LCMT2O60294 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LCMT2O60294 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
LCMT2O60294 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LCMT2O60294 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.85■■□□□ 1.09
LCMT2O60294 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.84■■□□□ 1.09
LCMT2O60294 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.84■■□□□ 1.09
LCMT2O60294 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
LCMT2O60294 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.84■■□□□ 1.09
LCMT2O60294 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.84■■□□□ 1.09
LCMT2O60294 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LCMT2O60294 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
LCMT2O60294 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
LCMT2O60294 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.84■■□□□ 1.09
LCMT2O60294 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LCMT2O60294 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LCMT2O60294 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LCMT2O60294 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LCMT2O60294 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
LCMT2O60294 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.83■■□□□ 1.09
LCMT2O60294 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LCMT2O60294 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
LCMT2O60294 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LCMT2O60294 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LCMT2O60294 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.83■■□□□ 1.09
LCMT2O60294 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LCMT2O60294 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.83■■□□□ 1.09
LCMT2O60294 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.83■■□□□ 1.09
LCMT2O60294 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
LCMT2O60294 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LCMT2O60294 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.08
LCMT2O60294 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LCMT2O60294 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LCMT2O60294 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
LCMT2O60294 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.82■■□□□ 1.08
LCMT2O60294 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
LCMT2O60294 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
LCMT2O60294 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.82■■□□□ 1.08
LCMT2O60294 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LCMT2O60294 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LCMT2O60294 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LCMT2O60294 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.81■■□□□ 1.08
LCMT2O60294 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.81■■□□□ 1.08
LCMT2O60294 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.81■■□□□ 1.08
LCMT2O60294 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
LCMT2O60294 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LCMT2O60294 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.8■■□□□ 1.08
LCMT2O60294 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
LCMT2O60294 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LCMT2O60294 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LCMT2O60294 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.8■■□□□ 1.08
LCMT2O60294 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LCMT2O60294 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LCMT2O60294 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.8■■□□□ 1.08
LCMT2O60294 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.8■■□□□ 1.08
LCMT2O60294 KRT16P3-201ENST00000439127 1283 ntBASIC21.8■■□□□ 1.08
LCMT2O60294 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.8■■□□□ 1.08
LCMT2O60294 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
LCMT2O60294 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LCMT2O60294 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LCMT2O60294 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
LCMT2O60294 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.79■■□□□ 1.08
LCMT2O60294 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.79■■□□□ 1.08
LCMT2O60294 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
LCMT2O60294 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LCMT2O60294 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LCMT2O60294 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.79■■□□□ 1.08
LCMT2O60294 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LCMT2O60294 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LCMT2O60294 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LCMT2O60294 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.78■■□□□ 1.08
LCMT2O60294 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.78■■□□□ 1.08
LCMT2O60294 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LCMT2O60294 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
LCMT2O60294 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LCMT2O60294 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.77■■□□□ 1.08
LCMT2O60294 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.77■■□□□ 1.08
LCMT2O60294 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
LCMT2O60294 AL356441.2-201ENST00000443009 864 ntBASIC21.77■■□□□ 1.08
LCMT2O60294 MIR6724-1-201ENST00000616420 92 ntBASIC21.77■■□□□ 1.08
LCMT2O60294 MIR6724-2-201ENST00000616483 92 ntBASIC21.77■■□□□ 1.08
LCMT2O60294 MIR6724-4-201ENST00000617390 92 ntBASIC21.77■■□□□ 1.08
LCMT2O60294 MIR6724-3-201ENST00000622482 92 ntBASIC21.77■■□□□ 1.08
LCMT2O60294 AC005703.6-201ENST00000623265 1329 ntBASIC21.77■■□□□ 1.07
LCMT2O60294 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LCMT2O60294 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LCMT2O60294 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LCMT2O60294 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LCMT2O60294 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LCMT2O60294 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
LCMT2O60294 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
LCMT2O60294 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
LCMT2O60294 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LCMT2O60294 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LCMT2O60294 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LCMT2O60294 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.76■■□□□ 1.07
LCMT2O60294 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
LCMT2O60294 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LCMT2O60294 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LCMT2O60294 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms