Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
XRCC2O43543 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
XRCC2O43543 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
XRCC2O43543 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
XRCC2O43543 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.74■□□□□ 0.75
XRCC2O43543 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
XRCC2O43543 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.74■□□□□ 0.75
XRCC2O43543 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.74■□□□□ 0.75
XRCC2O43543 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.74■□□□□ 0.75
XRCC2O43543 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
XRCC2O43543 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
XRCC2O43543 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
XRCC2O43543 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
XRCC2O43543 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
XRCC2O43543 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
XRCC2O43543 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
XRCC2O43543 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.74■□□□□ 0.75
XRCC2O43543 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
XRCC2O43543 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
XRCC2O43543 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
XRCC2O43543 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.73■□□□□ 0.75
XRCC2O43543 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
XRCC2O43543 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
XRCC2O43543 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.73■□□□□ 0.75
XRCC2O43543 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.73■□□□□ 0.75
XRCC2O43543 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
XRCC2O43543 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
XRCC2O43543 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
XRCC2O43543 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
XRCC2O43543 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRCC2O43543 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRCC2O43543 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
XRCC2O43543 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRCC2O43543 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRCC2O43543 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRCC2O43543 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.72■□□□□ 0.75
XRCC2O43543 AC004448.1-201ENST00000458332 883 ntBASIC19.72■□□□□ 0.75
XRCC2O43543 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRCC2O43543 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
XRCC2O43543 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRCC2O43543 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRCC2O43543 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRCC2O43543 AC137630.3-201ENST00000607245 391 ntBASIC19.71■□□□□ 0.75
XRCC2O43543 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
XRCC2O43543 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.71■□□□□ 0.75
XRCC2O43543 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRCC2O43543 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.71■□□□□ 0.75
XRCC2O43543 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
XRCC2O43543 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
XRCC2O43543 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
XRCC2O43543 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
XRCC2O43543 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
XRCC2O43543 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.7■□□□□ 0.74
XRCC2O43543 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
XRCC2O43543 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
XRCC2O43543 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
XRCC2O43543 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRCC2O43543 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRCC2O43543 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
XRCC2O43543 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.69■□□□□ 0.74
XRCC2O43543 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
XRCC2O43543 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.69■□□□□ 0.74
XRCC2O43543 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
XRCC2O43543 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRCC2O43543 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.69■□□□□ 0.74
XRCC2O43543 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.68■□□□□ 0.74
XRCC2O43543 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
XRCC2O43543 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC2O43543 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC2O43543 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC2O43543 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC2O43543 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC2O43543 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC2O43543 DUSP8P5-201ENST00000422884 1815 ntBASIC19.67■□□□□ 0.74
XRCC2O43543 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
XRCC2O43543 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
XRCC2O43543 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
XRCC2O43543 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
XRCC2O43543 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.67■□□□□ 0.74
XRCC2O43543 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.67■□□□□ 0.74
XRCC2O43543 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XRCC2O43543 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
XRCC2O43543 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.66■□□□□ 0.74
XRCC2O43543 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
XRCC2O43543 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
XRCC2O43543 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
XRCC2O43543 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.66■□□□□ 0.74
XRCC2O43543 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
XRCC2O43543 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
XRCC2O43543 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
XRCC2O43543 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
XRCC2O43543 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
XRCC2O43543 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
XRCC2O43543 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
XRCC2O43543 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
XRCC2O43543 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.65■□□□□ 0.74
XRCC2O43543 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.65■□□□□ 0.74
XRCC2O43543 BX664725.1-201ENST00000438252 379 ntBASIC19.65■□□□□ 0.74
XRCC2O43543 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.65■□□□□ 0.74
XRCC2O43543 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms