Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 MIR4651-201ENST00000582622 73 ntBASIC39.81■■■■□ 3.96
CUX2O14529 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
CUX2O14529 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC39.8■■■■□ 3.96
CUX2O14529 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC39.8■■■■□ 3.96
CUX2O14529 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC39.8■■■■□ 3.96
CUX2O14529 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC39.8■■■■□ 3.96
CUX2O14529 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
CUX2O14529 AC139426.1-201ENST00000568218 2529 ntBASIC39.8■■■■□ 3.96
CUX2O14529 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC39.8■■■■□ 3.96
CUX2O14529 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
CUX2O14529 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
CUX2O14529 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC39.8■■■■□ 3.96
CUX2O14529 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC39.79■■■■□ 3.96
CUX2O14529 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC39.79■■■■□ 3.96
CUX2O14529 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC39.79■■■■□ 3.96
CUX2O14529 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC39.79■■■■□ 3.96
CUX2O14529 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC39.79■■■■□ 3.96
CUX2O14529 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC39.79■■■■□ 3.96
CUX2O14529 AC016769.1-201ENST00000409132 1010 ntBASIC39.79■■■■□ 3.96
CUX2O14529 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC39.79■■■■□ 3.96
CUX2O14529 LINC02228-203ENST00000641970 1355 ntBASIC39.79■■■■□ 3.96
CUX2O14529 AP004609.3-201ENST00000610705 1884 ntBASIC39.78■■■■□ 3.96
CUX2O14529 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC39.78■■■■□ 3.96
CUX2O14529 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC39.78■■■■□ 3.96
CUX2O14529 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC39.78■■■■□ 3.96
CUX2O14529 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC39.78■■■■□ 3.96
CUX2O14529 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
CUX2O14529 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC39.77■■■■□ 3.96
CUX2O14529 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC39.77■■■■□ 3.96
CUX2O14529 AC241377.3-202ENST00000626088 1088 ntBASIC39.77■■■■□ 3.96
CUX2O14529 AC241585.3-202ENST00000628937 1088 ntBASIC39.77■■■■□ 3.96
CUX2O14529 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC39.76■■■■□ 3.96
CUX2O14529 AC006455.2-201ENST00000429931 906 ntBASIC39.76■■■■□ 3.96
CUX2O14529 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC39.75■■■■□ 3.95
CUX2O14529 IGHV3-19-201ENST00000521488 291 ntBASIC39.75■■■■□ 3.95
CUX2O14529 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC39.75■■■■□ 3.95
CUX2O14529 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC39.75■■■■□ 3.95
CUX2O14529 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC39.75■■■■□ 3.95
CUX2O14529 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC39.75■■■■□ 3.95
CUX2O14529 HSCB-202ENST00000398941 955 ntTSL 2 BASIC39.75■■■■□ 3.95
CUX2O14529 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC39.75■■■■□ 3.95
CUX2O14529 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC39.74■■■■□ 3.95
CUX2O14529 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
CUX2O14529 NT5C3AP1-201ENST00000394500 1012 ntBASIC39.74■■■■□ 3.95
CUX2O14529 GAMT-205ENST00000640762 751 ntTSL 5 BASIC39.74■■■■□ 3.95
CUX2O14529 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC39.73■■■■□ 3.95
CUX2O14529 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC39.73■■■■□ 3.95
CUX2O14529 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
CUX2O14529 AC137761.2-201ENST00000561729 223 ntBASIC39.73■■■■□ 3.95
CUX2O14529 AC145350.3-201ENST00000569033 163 ntBASIC39.73■■■■□ 3.95
CUX2O14529 AC008687.6-201ENST00000596318 630 ntBASIC39.73■■■■□ 3.95
CUX2O14529 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC39.73■■■■□ 3.95
CUX2O14529 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC39.72■■■■□ 3.95
CUX2O14529 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC39.72■■■■□ 3.95
CUX2O14529 MIR663A-201ENST00000385250 93 ntBASIC39.72■■■■□ 3.95
CUX2O14529 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC39.72■■■■□ 3.95
CUX2O14529 CBFB-203ENST00000561924 584 ntTSL 5 BASIC39.72■■■■□ 3.95
CUX2O14529 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC39.71■■■■□ 3.95
CUX2O14529 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC39.71■■■■□ 3.95
CUX2O14529 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
CUX2O14529 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC39.71■■■■□ 3.95
CUX2O14529 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC39.7■■■■□ 3.95
CUX2O14529 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC39.7■■■■□ 3.95
CUX2O14529 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC39.7■■■■□ 3.95
CUX2O14529 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC39.7■■■■□ 3.95
CUX2O14529 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC39.69■■■■□ 3.94
CUX2O14529 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC39.69■■■■□ 3.94
CUX2O14529 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC39.69■■■■□ 3.94
CUX2O14529 C17orf82-201ENST00000623772 1530 ntBASIC39.69■■■■□ 3.94
CUX2O14529 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC39.69■■■■□ 3.94
CUX2O14529 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC39.68■■■■□ 3.94
CUX2O14529 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC39.68■■■■□ 3.94
CUX2O14529 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC39.68■■■■□ 3.94
CUX2O14529 MIR3181-201ENST00000578512 73 ntBASIC39.68■■■■□ 3.94
CUX2O14529 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC39.68■■■■□ 3.94
CUX2O14529 AC090877.2-201ENST00000558441 1738 ntBASIC39.67■■■■□ 3.94
CUX2O14529 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC39.67■■■■□ 3.94
CUX2O14529 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC39.67■■■■□ 3.94
CUX2O14529 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC39.67■■■■□ 3.94
CUX2O14529 BID-214ENST00000617586 542 ntTSL 5 BASIC39.67■■■■□ 3.94
CUX2O14529 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC39.67■■■■□ 3.94
CUX2O14529 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC39.66■■■■□ 3.94
CUX2O14529 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
CUX2O14529 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC39.66■■■■□ 3.94
CUX2O14529 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC39.66■■■■□ 3.94
CUX2O14529 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
CUX2O14529 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC39.65■■■■□ 3.94
CUX2O14529 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC39.65■■■■□ 3.94
CUX2O14529 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
CUX2O14529 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC39.65■■■■□ 3.94
CUX2O14529 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC39.64■■■■□ 3.94
CUX2O14529 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC39.64■■■■□ 3.94
CUX2O14529 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC39.64■■■■□ 3.94
CUX2O14529 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC39.64■■■■□ 3.94
CUX2O14529 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
CUX2O14529 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
CUX2O14529 FOXO3B-201ENST00000395675 1928 ntBASIC39.64■■■■□ 3.94
CUX2O14529 GPX1P1-201ENST00000388829 606 ntBASIC39.63■■■■□ 3.94
CUX2O14529 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC39.63■■■■□ 3.94
CUX2O14529 WT1-AS_3.1-201ENST00000613262 234 ntBASIC39.63■■■■□ 3.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms