Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.75■■□□□ 1.55
SOX1O00570 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.75■■□□□ 1.55
SOX1O00570 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
SOX1O00570 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.75■■□□□ 1.55
SOX1O00570 AC142472.1-201ENST00000612013 1741 ntBASIC24.75■■□□□ 1.55
SOX1O00570 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.74■■□□□ 1.55
SOX1O00570 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.74■■□□□ 1.55
SOX1O00570 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.74■■□□□ 1.55
SOX1O00570 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SOX1O00570 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
SOX1O00570 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.73■■□□□ 1.55
SOX1O00570 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SOX1O00570 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.73■■□□□ 1.55
SOX1O00570 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.73■■□□□ 1.55
SOX1O00570 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SOX1O00570 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SOX1O00570 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
SOX1O00570 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
SOX1O00570 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SOX1O00570 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SOX1O00570 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.72■■□□□ 1.55
SOX1O00570 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SOX1O00570 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SOX1O00570 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.72■■□□□ 1.55
SOX1O00570 AP005435.1-201ENST00000529293 1178 ntBASIC24.72■■□□□ 1.55
SOX1O00570 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.72■■□□□ 1.55
SOX1O00570 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SOX1O00570 GPX1P1-201ENST00000388829 606 ntBASIC24.71■■□□□ 1.55
SOX1O00570 AC142086.2-201ENST00000569753 217 ntBASIC24.71■■□□□ 1.55
SOX1O00570 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
SOX1O00570 BID-214ENST00000617586 542 ntTSL 5 BASIC24.71■■□□□ 1.55
SOX1O00570 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
SOX1O00570 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
SOX1O00570 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SOX1O00570 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SOX1O00570 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
SOX1O00570 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.7■■□□□ 1.55
SOX1O00570 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.7■■□□□ 1.55
SOX1O00570 MIR663A-201ENST00000385250 93 ntBASIC24.7■■□□□ 1.54
SOX1O00570 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SOX1O00570 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SOX1O00570 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SOX1O00570 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SOX1O00570 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
SOX1O00570 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
SOX1O00570 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SOX1O00570 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.69■■□□□ 1.54
SOX1O00570 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.69■■□□□ 1.54
SOX1O00570 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.69■■□□□ 1.54
SOX1O00570 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SOX1O00570 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SOX1O00570 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
SOX1O00570 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SOX1O00570 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
SOX1O00570 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SOX1O00570 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
SOX1O00570 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
SOX1O00570 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SOX1O00570 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.68■■□□□ 1.54
SOX1O00570 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC24.68■■□□□ 1.54
SOX1O00570 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
SOX1O00570 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SOX1O00570 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.67■■□□□ 1.54
SOX1O00570 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SOX1O00570 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.67■■□□□ 1.54
SOX1O00570 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
SOX1O00570 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.67■■□□□ 1.54
SOX1O00570 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.67■■□□□ 1.54
SOX1O00570 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.67■■□□□ 1.54
SOX1O00570 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SOX1O00570 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
SOX1O00570 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC24.66■■□□□ 1.54
SOX1O00570 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC24.66■■□□□ 1.54
SOX1O00570 AC087239.1-201ENST00000622671 572 ntBASIC24.66■■□□□ 1.54
SOX1O00570 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SOX1O00570 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SOX1O00570 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SOX1O00570 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SOX1O00570 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SOX1O00570 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SOX1O00570 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
SOX1O00570 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.65■■□□□ 1.54
SOX1O00570 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.65■■□□□ 1.54
SOX1O00570 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.65■■□□□ 1.54
SOX1O00570 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SOX1O00570 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SOX1O00570 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SOX1O00570 FAM201B-201ENST00000458407 597 ntBASIC24.64■■□□□ 1.54
SOX1O00570 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.64■■□□□ 1.54
SOX1O00570 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.64■■□□□ 1.54
SOX1O00570 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.63■■□□□ 1.53
SOX1O00570 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.63■■□□□ 1.53
SOX1O00570 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SOX1O00570 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC24.63■■□□□ 1.53
SOX1O00570 pRNA.6-201ENST00000610482 90 ntBASIC24.63■■□□□ 1.53
SOX1O00570 pRNA.5-201ENST00000612139 90 ntBASIC24.63■■□□□ 1.53
SOX1O00570 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SOX1O00570 pRNA.11-201ENST00000618423 90 ntBASIC24.63■■□□□ 1.53
SOX1O00570 pRNA.13-201ENST00000619112 90 ntBASIC24.63■■□□□ 1.53
SOX1O00570 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms