Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.89■■□□□ 1.41
YJEFN3A6XGL0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
YJEFN3A6XGL0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
YJEFN3A6XGL0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
YJEFN3A6XGL0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.41
YJEFN3A6XGL0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
YJEFN3A6XGL0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
YJEFN3A6XGL0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.88■■□□□ 1.41
YJEFN3A6XGL0 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.88■■□□□ 1.41
YJEFN3A6XGL0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.88■■□□□ 1.41
YJEFN3A6XGL0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.88■■□□□ 1.41
YJEFN3A6XGL0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.88■■□□□ 1.41
YJEFN3A6XGL0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
YJEFN3A6XGL0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
YJEFN3A6XGL0 ABCB10P4-201ENST00000566803 2184 ntBASIC23.87■■□□□ 1.41
YJEFN3A6XGL0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.87■■□□□ 1.41
YJEFN3A6XGL0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.87■■□□□ 1.41
YJEFN3A6XGL0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
YJEFN3A6XGL0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.87■■□□□ 1.41
YJEFN3A6XGL0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
YJEFN3A6XGL0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
YJEFN3A6XGL0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
YJEFN3A6XGL0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
YJEFN3A6XGL0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.86■■□□□ 1.41
YJEFN3A6XGL0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.86■■□□□ 1.41
YJEFN3A6XGL0 AL356740.2-201ENST00000601559 647 ntBASIC23.86■■□□□ 1.41
YJEFN3A6XGL0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
YJEFN3A6XGL0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
YJEFN3A6XGL0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.86■■□□□ 1.41
YJEFN3A6XGL0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
YJEFN3A6XGL0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
YJEFN3A6XGL0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
YJEFN3A6XGL0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.85■■□□□ 1.41
YJEFN3A6XGL0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.85■■□□□ 1.41
YJEFN3A6XGL0 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.85■■□□□ 1.41
YJEFN3A6XGL0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.85■■□□□ 1.41
YJEFN3A6XGL0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
YJEFN3A6XGL0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
YJEFN3A6XGL0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
YJEFN3A6XGL0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
YJEFN3A6XGL0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.84■■□□□ 1.41
YJEFN3A6XGL0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
YJEFN3A6XGL0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
YJEFN3A6XGL0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
YJEFN3A6XGL0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.84■■□□□ 1.41
YJEFN3A6XGL0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
YJEFN3A6XGL0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
YJEFN3A6XGL0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
YJEFN3A6XGL0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.84■■□□□ 1.41
YJEFN3A6XGL0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.84■■□□□ 1.41
YJEFN3A6XGL0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
YJEFN3A6XGL0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
YJEFN3A6XGL0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
YJEFN3A6XGL0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
YJEFN3A6XGL0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.83■■□□□ 1.41
YJEFN3A6XGL0 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.83■■□□□ 1.41
YJEFN3A6XGL0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.83■■□□□ 1.4
YJEFN3A6XGL0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
YJEFN3A6XGL0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
YJEFN3A6XGL0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
YJEFN3A6XGL0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
YJEFN3A6XGL0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
YJEFN3A6XGL0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.82■■□□□ 1.4
YJEFN3A6XGL0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.82■■□□□ 1.4
YJEFN3A6XGL0 AC093323.1-202ENST00000635031 2045 ntBASIC23.82■■□□□ 1.4
YJEFN3A6XGL0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
YJEFN3A6XGL0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
YJEFN3A6XGL0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
YJEFN3A6XGL0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
YJEFN3A6XGL0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.81■■□□□ 1.4
YJEFN3A6XGL0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
YJEFN3A6XGL0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.81■■□□□ 1.4
YJEFN3A6XGL0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
YJEFN3A6XGL0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
YJEFN3A6XGL0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
YJEFN3A6XGL0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
YJEFN3A6XGL0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
YJEFN3A6XGL0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
YJEFN3A6XGL0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
YJEFN3A6XGL0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
YJEFN3A6XGL0 AC131281.2-201ENST00000520478 145 ntBASIC23.8■■□□□ 1.4
YJEFN3A6XGL0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.8■■□□□ 1.4
YJEFN3A6XGL0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
YJEFN3A6XGL0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
YJEFN3A6XGL0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
YJEFN3A6XGL0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
YJEFN3A6XGL0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
YJEFN3A6XGL0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
YJEFN3A6XGL0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
YJEFN3A6XGL0 AL512631.2-201ENST00000604634 923 ntBASIC23.79■■□□□ 1.4
YJEFN3A6XGL0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
YJEFN3A6XGL0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
YJEFN3A6XGL0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
YJEFN3A6XGL0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
YJEFN3A6XGL0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
YJEFN3A6XGL0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
YJEFN3A6XGL0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
YJEFN3A6XGL0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.78■■□□□ 1.4
YJEFN3A6XGL0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.78■■□□□ 1.4
YJEFN3A6XGL0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms