Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.68■□□□□ 0.74
HMX3A6NHT5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMX3A6NHT5 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMX3A6NHT5 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMX3A6NHT5 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMX3A6NHT5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HMX3A6NHT5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.68■□□□□ 0.74
HMX3A6NHT5 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMX3A6NHT5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HMX3A6NHT5 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMX3A6NHT5 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HMX3A6NHT5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMX3A6NHT5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMX3A6NHT5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMX3A6NHT5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.67■□□□□ 0.74
HMX3A6NHT5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMX3A6NHT5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
HMX3A6NHT5 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HMX3A6NHT5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMX3A6NHT5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMX3A6NHT5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMX3A6NHT5 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMX3A6NHT5 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMX3A6NHT5 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.66■□□□□ 0.74
HMX3A6NHT5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMX3A6NHT5 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HMX3A6NHT5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMX3A6NHT5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMX3A6NHT5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HMX3A6NHT5 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.66■□□□□ 0.74
HMX3A6NHT5 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.65■□□□□ 0.74
HMX3A6NHT5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMX3A6NHT5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HMX3A6NHT5 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HMX3A6NHT5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HMX3A6NHT5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.65■□□□□ 0.74
HMX3A6NHT5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMX3A6NHT5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMX3A6NHT5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMX3A6NHT5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.65■□□□□ 0.74
HMX3A6NHT5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HMX3A6NHT5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMX3A6NHT5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMX3A6NHT5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMX3A6NHT5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMX3A6NHT5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HMX3A6NHT5 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.64■□□□□ 0.74
HMX3A6NHT5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HMX3A6NHT5 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.64■□□□□ 0.74
HMX3A6NHT5 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HMX3A6NHT5 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HMX3A6NHT5 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMX3A6NHT5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMX3A6NHT5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.64■□□□□ 0.73
HMX3A6NHT5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HMX3A6NHT5 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HMX3A6NHT5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMX3A6NHT5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMX3A6NHT5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
HMX3A6NHT5 ANOS2P-203ENST00000472227 1816 ntBASIC19.63■□□□□ 0.73
HMX3A6NHT5 AC242852.2-201ENST00000615738 1807 ntBASIC19.63■□□□□ 0.73
HMX3A6NHT5 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMX3A6NHT5 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMX3A6NHT5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
HMX3A6NHT5 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HMX3A6NHT5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.63■□□□□ 0.73
HMX3A6NHT5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HMX3A6NHT5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMX3A6NHT5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMX3A6NHT5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMX3A6NHT5 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HMX3A6NHT5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
HMX3A6NHT5 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMX3A6NHT5 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.62■□□□□ 0.73
HMX3A6NHT5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMX3A6NHT5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMX3A6NHT5 AC008813.1-201ENST00000536597 885 ntBASIC19.62■□□□□ 0.73
HMX3A6NHT5 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HMX3A6NHT5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HMX3A6NHT5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.62■□□□□ 0.73
HMX3A6NHT5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HMX3A6NHT5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HMX3A6NHT5 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HMX3A6NHT5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HMX3A6NHT5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.61■□□□□ 0.73
HMX3A6NHT5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
HMX3A6NHT5 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HMX3A6NHT5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMX3A6NHT5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMX3A6NHT5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.61■□□□□ 0.73
HMX3A6NHT5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMX3A6NHT5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMX3A6NHT5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.61■□□□□ 0.73
HMX3A6NHT5 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.61■□□□□ 0.73
HMX3A6NHT5 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.61■□□□□ 0.73
HMX3A6NHT5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMX3A6NHT5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMX3A6NHT5 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMX3A6NHT5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMX3A6NHT5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms