Protein–RNA interactions for Protein: A0A1B0GVV1

SMIM35, Small integral membrane protein 35, humanhuman

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM35A0A1B0GVV1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SMIM35A0A1B0GVV1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
SMIM35A0A1B0GVV1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.13■■□□□ 1.61
SMIM35A0A1B0GVV1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.13■■□□□ 1.61
SMIM35A0A1B0GVV1 AL138724.1-201ENST00000606771 1088 ntBASIC25.13■■□□□ 1.61
SMIM35A0A1B0GVV1 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.13■■□□□ 1.61
SMIM35A0A1B0GVV1 AL136967.2-201ENST00000623968 743 ntBASIC25.13■■□□□ 1.61
SMIM35A0A1B0GVV1 AC241377.3-202ENST00000626088 1088 ntBASIC25.13■■□□□ 1.61
SMIM35A0A1B0GVV1 AC241585.3-202ENST00000628937 1088 ntBASIC25.13■■□□□ 1.61
SMIM35A0A1B0GVV1 AC245100.8-202ENST00000629247 1058 ntBASIC25.13■■□□□ 1.61
SMIM35A0A1B0GVV1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SMIM35A0A1B0GVV1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
SMIM35A0A1B0GVV1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
SMIM35A0A1B0GVV1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SMIM35A0A1B0GVV1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.13■■□□□ 1.61
SMIM35A0A1B0GVV1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMIM35A0A1B0GVV1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMIM35A0A1B0GVV1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SMIM35A0A1B0GVV1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
SMIM35A0A1B0GVV1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
SMIM35A0A1B0GVV1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.11■■□□□ 1.61
SMIM35A0A1B0GVV1 ALDH1A3-203ENST00000557963 1670 ntBASIC25.11■■□□□ 1.61
SMIM35A0A1B0GVV1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMIM35A0A1B0GVV1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMIM35A0A1B0GVV1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.11■■□□□ 1.61
SMIM35A0A1B0GVV1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SMIM35A0A1B0GVV1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMIM35A0A1B0GVV1 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.11■■□□□ 1.61
SMIM35A0A1B0GVV1 MIR4767-201ENST00000582827 78 ntBASIC25.11■■□□□ 1.61
SMIM35A0A1B0GVV1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
SMIM35A0A1B0GVV1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMIM35A0A1B0GVV1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMIM35A0A1B0GVV1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.11■■□□□ 1.61
SMIM35A0A1B0GVV1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.11■■□□□ 1.61
SMIM35A0A1B0GVV1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SMIM35A0A1B0GVV1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SMIM35A0A1B0GVV1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SMIM35A0A1B0GVV1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.1■■□□□ 1.61
SMIM35A0A1B0GVV1 MIR939-201ENST00000401314 82 ntBASIC25.1■■□□□ 1.61
SMIM35A0A1B0GVV1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.1■■□□□ 1.61
SMIM35A0A1B0GVV1 AF213884.3-201ENST00000563833 479 ntBASIC25.1■■□□□ 1.61
SMIM35A0A1B0GVV1 AC011298.3-201ENST00000615796 283 ntBASIC25.1■■□□□ 1.61
SMIM35A0A1B0GVV1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.1■■□□□ 1.61
SMIM35A0A1B0GVV1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SMIM35A0A1B0GVV1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SMIM35A0A1B0GVV1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SMIM35A0A1B0GVV1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.09■■□□□ 1.61
SMIM35A0A1B0GVV1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SMIM35A0A1B0GVV1 AP001330.3-201ENST00000520123 633 ntBASIC25.09■■□□□ 1.61
SMIM35A0A1B0GVV1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
SMIM35A0A1B0GVV1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMIM35A0A1B0GVV1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SMIM35A0A1B0GVV1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SMIM35A0A1B0GVV1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SMIM35A0A1B0GVV1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SMIM35A0A1B0GVV1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.08■■□□□ 1.61
SMIM35A0A1B0GVV1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
SMIM35A0A1B0GVV1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.08■■□□□ 1.61
SMIM35A0A1B0GVV1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
SMIM35A0A1B0GVV1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
SMIM35A0A1B0GVV1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMIM35A0A1B0GVV1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.07■■□□□ 1.6
SMIM35A0A1B0GVV1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.07■■□□□ 1.6
SMIM35A0A1B0GVV1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.07■■□□□ 1.6
SMIM35A0A1B0GVV1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.06■■□□□ 1.6
SMIM35A0A1B0GVV1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SMIM35A0A1B0GVV1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.06■■□□□ 1.6
SMIM35A0A1B0GVV1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SMIM35A0A1B0GVV1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SMIM35A0A1B0GVV1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
SMIM35A0A1B0GVV1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SMIM35A0A1B0GVV1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SMIM35A0A1B0GVV1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.06■■□□□ 1.6
SMIM35A0A1B0GVV1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
SMIM35A0A1B0GVV1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMIM35A0A1B0GVV1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SMIM35A0A1B0GVV1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
SMIM35A0A1B0GVV1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMIM35A0A1B0GVV1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.05■■□□□ 1.6
SMIM35A0A1B0GVV1 AC091305.1-201ENST00000479476 895 ntBASIC25.05■■□□□ 1.6
SMIM35A0A1B0GVV1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.05■■□□□ 1.6
SMIM35A0A1B0GVV1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SMIM35A0A1B0GVV1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMIM35A0A1B0GVV1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMIM35A0A1B0GVV1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
SMIM35A0A1B0GVV1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.04■■□□□ 1.6
SMIM35A0A1B0GVV1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SMIM35A0A1B0GVV1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SMIM35A0A1B0GVV1 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.04■■□□□ 1.6
SMIM35A0A1B0GVV1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.04■■□□□ 1.6
SMIM35A0A1B0GVV1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.04■■□□□ 1.6
SMIM35A0A1B0GVV1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.04■■□□□ 1.6
SMIM35A0A1B0GVV1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
SMIM35A0A1B0GVV1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SMIM35A0A1B0GVV1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMIM35A0A1B0GVV1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
SMIM35A0A1B0GVV1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMIM35A0A1B0GVV1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.03■■□□□ 1.6
SMIM35A0A1B0GVV1 AC006455.2-201ENST00000429931 906 ntBASIC25.03■■□□□ 1.6
SMIM35A0A1B0GVV1 AC105265.2-201ENST00000467189 838 ntBASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms