Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV2A0A0B4J234 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV2A0A0B4J234 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV2A0A0B4J234 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV2A0A0B4J234 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRAV2A0A0B4J234 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV2A0A0B4J234 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRAV2A0A0B4J234 MIR4787-201ENST00000607364 84 ntBASIC17.15■□□□□ 0.34
TRAV2A0A0B4J234 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAV2A0A0B4J234 ALDH1A3-203ENST00000557963 1670 ntBASIC17.15■□□□□ 0.34
TRAV2A0A0B4J234 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV2A0A0B4J234 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV2A0A0B4J234 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV2A0A0B4J234 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV2A0A0B4J234 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV2A0A0B4J234 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV2A0A0B4J234 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV2A0A0B4J234 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRAV2A0A0B4J234 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRAV2A0A0B4J234 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV2A0A0B4J234 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.14■□□□□ 0.33
TRAV2A0A0B4J234 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV2A0A0B4J234 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV2A0A0B4J234 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TRAV2A0A0B4J234 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TRAV2A0A0B4J234 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TRAV2A0A0B4J234 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV2A0A0B4J234 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.14■□□□□ 0.33
TRAV2A0A0B4J234 AL035685.1-201ENST00000636663 812 ntBASIC17.14■□□□□ 0.33
TRAV2A0A0B4J234 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV2A0A0B4J234 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV2A0A0B4J234 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV2A0A0B4J234 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.14■□□□□ 0.33
TRAV2A0A0B4J234 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV2A0A0B4J234 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRAV2A0A0B4J234 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV2A0A0B4J234 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV2A0A0B4J234 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV2A0A0B4J234 AC239859.2-201ENST00000444165 318 ntBASIC17.13■□□□□ 0.33
TRAV2A0A0B4J234 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV2A0A0B4J234 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV2A0A0B4J234 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.13■□□□□ 0.33
TRAV2A0A0B4J234 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV2A0A0B4J234 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRAV2A0A0B4J234 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRAV2A0A0B4J234 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV2A0A0B4J234 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV2A0A0B4J234 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV2A0A0B4J234 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV2A0A0B4J234 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRAV2A0A0B4J234 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.12■□□□□ 0.33
TRAV2A0A0B4J234 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
TRAV2A0A0B4J234 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRAV2A0A0B4J234 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV2A0A0B4J234 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV2A0A0B4J234 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV2A0A0B4J234 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRAV2A0A0B4J234 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV2A0A0B4J234 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV2A0A0B4J234 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV2A0A0B4J234 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV2A0A0B4J234 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV2A0A0B4J234 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.11■□□□□ 0.33
TRAV2A0A0B4J234 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV2A0A0B4J234 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV2A0A0B4J234 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV2A0A0B4J234 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV2A0A0B4J234 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV2A0A0B4J234 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV2A0A0B4J234 AC004812.2-201ENST00000611079 2094 ntBASIC17.1■□□□□ 0.33
TRAV2A0A0B4J234 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV2A0A0B4J234 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV2A0A0B4J234 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.1■□□□□ 0.33
TRAV2A0A0B4J234 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV2A0A0B4J234 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRAV2A0A0B4J234 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV2A0A0B4J234 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV2A0A0B4J234 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV2A0A0B4J234 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRAV2A0A0B4J234 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRAV2A0A0B4J234 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV2A0A0B4J234 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV2A0A0B4J234 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 MTDHP2-201ENST00000601468 714 ntBASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms