Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP3Q9Y2W7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
KCNIP3Q9Y2W7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.4□□□□□ -0.42
KCNIP3Q9Y2W7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
KCNIP3Q9Y2W7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.4□□□□□ -0.42
KCNIP3Q9Y2W7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.4□□□□□ -0.42
KCNIP3Q9Y2W7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.4□□□□□ -0.42
KCNIP3Q9Y2W7 AC026150.2-201ENST00000564693 1156 ntBASIC12.4□□□□□ -0.42
KCNIP3Q9Y2W7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
KCNIP3Q9Y2W7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.4□□□□□ -0.42
KCNIP3Q9Y2W7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.4□□□□□ -0.42
KCNIP3Q9Y2W7 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP3Q9Y2W7 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP3Q9Y2W7 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP3Q9Y2W7 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
KCNIP3Q9Y2W7 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
KCNIP3Q9Y2W7 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP3Q9Y2W7 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
KCNIP3Q9Y2W7 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP3Q9Y2W7 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP3Q9Y2W7 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP3Q9Y2W7 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
KCNIP3Q9Y2W7 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
KCNIP3Q9Y2W7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
KCNIP3Q9Y2W7 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
KCNIP3Q9Y2W7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
KCNIP3Q9Y2W7 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
KCNIP3Q9Y2W7 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 RN7SL832P-201ENST00000607781 1756 ntBASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 AL645937.2-201ENST00000396808 931 ntBASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 MKNK2P1-201ENST00000437526 628 ntBASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 AC000095.1-201ENST00000603208 874 ntBASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 AC140113.2-201ENST00000604370 208 ntBASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 MIR6074-201ENST00000612054 107 ntBASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 C20orf181-201ENST00000623918 480 ntBASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 AC012617.1-204ENST00000586340 2305 ntBASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
KCNIP3Q9Y2W7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms