Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 AC018362.1-201ENST00000564805 846 ntTSL 5 BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 AC138894.2-201ENST00000602838 371 ntBASIC14.2□□□□□ -0.14
LHX6Q9UPM6 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 AL138799.1-201ENST00000448213 1675 ntBASIC14.2□□□□□ -0.14
LHX6Q9UPM6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LHX6Q9UPM6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 MRPL37P1-201ENST00000592451 1337 ntBASIC14.19□□□□□ -0.14
LHX6Q9UPM6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 RNU6-1176P-201ENST00000390955 107 ntBASIC14.19□□□□□ -0.14
LHX6Q9UPM6 PPIL3-202ENST00000392283 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 AL050305.1-201ENST00000399993 1230 ntBASIC14.19□□□□□ -0.14
LHX6Q9UPM6 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 OR10B1P-201ENST00000601666 907 ntBASIC14.19□□□□□ -0.14
LHX6Q9UPM6 AC244250.3-201ENST00000620749 366 ntBASIC14.19□□□□□ -0.14
LHX6Q9UPM6 AC007718.1-201ENST00000621078 280 ntBASIC14.19□□□□□ -0.14
LHX6Q9UPM6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 AC018892.3-201ENST00000623986 2499 ntBASIC14.19□□□□□ -0.14
LHX6Q9UPM6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 AC092384.3-202ENST00000564646 2873 ntBASIC14.19□□□□□ -0.14
LHX6Q9UPM6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LHX6Q9UPM6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 AC104581.4-201ENST00000623126 3052 ntBASIC14.18□□□□□ -0.14
LHX6Q9UPM6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms