Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 SOCS2P1-201ENST00000417727 557 ntBASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 VDAC1P7-201ENST00000462417 847 ntBASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 ELK1P1-201ENST00000485699 580 ntBASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 AC026410.3-201ENST00000514280 936 ntBASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 AC133539.2-201ENST00000604757 467 ntBASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 AC093813.1-201ENST00000605066 256 ntBASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 MIR8072-201ENST00000614241 80 ntBASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LIN7CQ9NUP9 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 DRD5P1-201ENST00000456605 1438 ntBASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 C1QBPP1-201ENST00000400117 770 ntBASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 AL162726.2-201ENST00000438986 1017 ntBASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms