Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.6■□□□□ 0.09
CD248Q9HCU0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD248Q9HCU0 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD248Q9HCU0 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD248Q9HCU0 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC15.6■□□□□ 0.09
CD248Q9HCU0 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD248Q9HCU0 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CD248Q9HCU0 KRT8P35-201ENST00000483942 1338 ntBASIC15.6■□□□□ 0.09
CD248Q9HCU0 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD248Q9HCU0 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CD248Q9HCU0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.6■□□□□ 0.09
CD248Q9HCU0 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.6■□□□□ 0.09
CD248Q9HCU0 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD248Q9HCU0 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CD248Q9HCU0 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.6■□□□□ 0.09
CD248Q9HCU0 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CD248Q9HCU0 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CD248Q9HCU0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD248Q9HCU0 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC15.6■□□□□ 0.09
CD248Q9HCU0 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.6■□□□□ 0.09
CD248Q9HCU0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD248Q9HCU0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD248Q9HCU0 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CD248Q9HCU0 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.59■□□□□ 0.09
CD248Q9HCU0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.59■□□□□ 0.09
CD248Q9HCU0 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC15.59■□□□□ 0.09
CD248Q9HCU0 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.59■□□□□ 0.09
CD248Q9HCU0 AC126335.2-201ENST00000623362 4637 ntBASIC15.59■□□□□ 0.09
CD248Q9HCU0 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
CD248Q9HCU0 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD248Q9HCU0 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD248Q9HCU0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.59■□□□□ 0.09
CD248Q9HCU0 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.59■□□□□ 0.09
CD248Q9HCU0 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD248Q9HCU0 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD248Q9HCU0 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.59■□□□□ 0.09
CD248Q9HCU0 ACTBP8-201ENST00000403258 1108 ntBASIC15.59■□□□□ 0.09
CD248Q9HCU0 MIR1247-201ENST00000408206 136 ntBASIC15.59■□□□□ 0.09
CD248Q9HCU0 GPAA1P2-201ENST00000417923 928 ntBASIC15.59■□□□□ 0.09
CD248Q9HCU0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.59■□□□□ 0.09
CD248Q9HCU0 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CD248Q9HCU0 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.59■□□□□ 0.09
CD248Q9HCU0 PFN1P12-201ENST00000455938 534 ntBASIC15.59■□□□□ 0.09
CD248Q9HCU0 AC099548.2-209ENST00000480264 625 ntBASIC15.59■□□□□ 0.09
CD248Q9HCU0 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.59■□□□□ 0.09
CD248Q9HCU0 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.59■□□□□ 0.09
CD248Q9HCU0 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
CD248Q9HCU0 AC023310.1-201ENST00000554836 735 ntBASIC15.59■□□□□ 0.09
CD248Q9HCU0 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.59■□□□□ 0.09
CD248Q9HCU0 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD248Q9HCU0 BX539320.1-201ENST00000623759 877 ntBASIC15.59■□□□□ 0.09
CD248Q9HCU0 PRSS30P-206ENST00000641773 873 ntBASIC15.59■□□□□ 0.09
CD248Q9HCU0 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CD248Q9HCU0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD248Q9HCU0 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC15.59■□□□□ 0.09
CD248Q9HCU0 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD248Q9HCU0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD248Q9HCU0 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.59■□□□□ 0.09
CD248Q9HCU0 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD248Q9HCU0 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CD248Q9HCU0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD248Q9HCU0 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD248Q9HCU0 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CD248Q9HCU0 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.59■□□□□ 0.09
CD248Q9HCU0 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD248Q9HCU0 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD248Q9HCU0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD248Q9HCU0 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD248Q9HCU0 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CD248Q9HCU0 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.59■□□□□ 0.09
CD248Q9HCU0 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CD248Q9HCU0 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC15.58■□□□□ 0.09
CD248Q9HCU0 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC15.58■□□□□ 0.09
CD248Q9HCU0 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.58■□□□□ 0.09
CD248Q9HCU0 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
CD248Q9HCU0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.58■□□□□ 0.09
CD248Q9HCU0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CD248Q9HCU0 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CD248Q9HCU0 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD248Q9HCU0 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD248Q9HCU0 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD248Q9HCU0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.58■□□□□ 0.08
CD248Q9HCU0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.58■□□□□ 0.08
CD248Q9HCU0 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD248Q9HCU0 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.58■□□□□ 0.08
CD248Q9HCU0 KRT18P25-201ENST00000508931 1278 ntBASIC15.58■□□□□ 0.08
CD248Q9HCU0 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD248Q9HCU0 AC025181.2-201ENST00000606994 802 ntBASIC15.58■□□□□ 0.08
CD248Q9HCU0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.58■□□□□ 0.08
CD248Q9HCU0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD248Q9HCU0 AC083964.2-201ENST00000623988 2396 ntBASIC15.58■□□□□ 0.08
CD248Q9HCU0 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD248Q9HCU0 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD248Q9HCU0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD248Q9HCU0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CD248Q9HCU0 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CD248Q9HCU0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD248Q9HCU0 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.58■□□□□ 0.08
CD248Q9HCU0 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD248Q9HCU0 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms