Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
CCL13Q99616 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.36□□□□□ -0.43
CCL13Q99616 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
CCL13Q99616 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CCL13Q99616 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.36□□□□□ -0.43
CCL13Q99616 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.36□□□□□ -0.43
CCL13Q99616 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.36□□□□□ -0.43
CCL13Q99616 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.36□□□□□ -0.43
CCL13Q99616 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.36□□□□□ -0.43
CCL13Q99616 RPS2P32-201ENST00000439199 892 ntBASIC12.36□□□□□ -0.43
CCL13Q99616 PUDPP3-201ENST00000445368 636 ntBASIC12.36□□□□□ -0.43
CCL13Q99616 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.36□□□□□ -0.43
CCL13Q99616 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.36□□□□□ -0.43
CCL13Q99616 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.36□□□□□ -0.43
CCL13Q99616 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.36□□□□□ -0.43
CCL13Q99616 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.36□□□□□ -0.43
CCL13Q99616 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.36□□□□□ -0.43
CCL13Q99616 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.36□□□□□ -0.43
CCL13Q99616 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.36□□□□□ -0.43
CCL13Q99616 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.36□□□□□ -0.43
CCL13Q99616 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CCL13Q99616 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CCL13Q99616 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.36□□□□□ -0.43
CCL13Q99616 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.36□□□□□ -0.43
CCL13Q99616 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CCL13Q99616 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.36□□□□□ -0.43
CCL13Q99616 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
CCL13Q99616 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
CCL13Q99616 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.36□□□□□ -0.43
CCL13Q99616 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.36□□□□□ -0.43
CCL13Q99616 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.36□□□□□ -0.43
CCL13Q99616 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL13Q99616 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL13Q99616 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL13Q99616 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
CCL13Q99616 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCL13Q99616 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL13Q99616 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCL13Q99616 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL13Q99616 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL13Q99616 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL13Q99616 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.35□□□□□ -0.43
CCL13Q99616 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL13Q99616 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL13Q99616 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCL13Q99616 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCL13Q99616 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.35□□□□□ -0.43
CCL13Q99616 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL13Q99616 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCL13Q99616 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCL13Q99616 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL13Q99616 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCL13Q99616 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.35□□□□□ -0.43
CCL13Q99616 AC100850.1-201ENST00000506768 649 ntBASIC12.35□□□□□ -0.43
CCL13Q99616 AC022447.6-201ENST00000515522 438 ntBASIC12.35□□□□□ -0.43
CCL13Q99616 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.35□□□□□ -0.43
CCL13Q99616 AL583810.1-201ENST00000553344 1045 ntBASIC12.35□□□□□ -0.43
CCL13Q99616 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL13Q99616 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.35□□□□□ -0.43
CCL13Q99616 RN7SL560P-201ENST00000577943 264 ntBASIC12.35□□□□□ -0.43
CCL13Q99616 EEF1DP1-201ENST00000585891 896 ntBASIC12.35□□□□□ -0.43
CCL13Q99616 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.35□□□□□ -0.43
CCL13Q99616 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.35□□□□□ -0.43
CCL13Q99616 AP001002.3-201ENST00000623482 206 ntBASIC12.35□□□□□ -0.43
CCL13Q99616 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL13Q99616 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.35□□□□□ -0.43
CCL13Q99616 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CCL13Q99616 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL13Q99616 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCL13Q99616 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL13Q99616 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCL13Q99616 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL13Q99616 ANKRD26P3-201ENST00000454044 2748 ntBASIC12.35□□□□□ -0.43
CCL13Q99616 AC097359.2-201ENST00000604992 2389 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms