Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 RPSAP31-201ENST00000416648 895 ntBASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 AC026320.2-201ENST00000434379 478 ntBASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 MIR3677-201ENST00000578964 60 ntBASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 MIR3188-201ENST00000583494 85 ntBASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 MIR6769A-201ENST00000617340 73 ntBASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.67■□□□□ 0.26
SYNGAP1Q96PV0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 LINC01101-201ENST00000622953 1884 ntBASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNGAP1Q96PV0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 CAP2P1-201ENST00000557743 1390 ntBASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms