Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
AP3S1Q92572 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
AP3S1Q92572 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
AP3S1Q92572 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
AP3S1Q92572 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
AP3S1Q92572 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.02□□□□□ -0.32
AP3S1Q92572 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
AP3S1Q92572 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
AP3S1Q92572 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S1Q92572 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S1Q92572 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S1Q92572 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S1Q92572 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.02□□□□□ -0.33
AP3S1Q92572 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
AP3S1Q92572 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.02□□□□□ -0.33
AP3S1Q92572 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.02□□□□□ -0.33
AP3S1Q92572 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.02□□□□□ -0.33
AP3S1Q92572 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S1Q92572 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.02□□□□□ -0.33
AP3S1Q92572 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.02□□□□□ -0.33
AP3S1Q92572 AC135782.3-201ENST00000562782 2105 ntBASIC13.02□□□□□ -0.33
AP3S1Q92572 AC018845.2-201ENST00000568326 409 ntBASIC13.02□□□□□ -0.33
AP3S1Q92572 AC105021.1-202ENST00000570572 669 ntBASIC13.02□□□□□ -0.33
AP3S1Q92572 AC066615.1-201ENST00000640911 628 ntBASIC13.02□□□□□ -0.33
AP3S1Q92572 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S1Q92572 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
AP3S1Q92572 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
AP3S1Q92572 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
AP3S1Q92572 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S1Q92572 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S1Q92572 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC13.02□□□□□ -0.33
AP3S1Q92572 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.02□□□□□ -0.33
AP3S1Q92572 POM121L14P-201ENST00000406100 1558 ntBASIC13.02□□□□□ -0.33
AP3S1Q92572 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S1Q92572 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
AP3S1Q92572 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S1Q92572 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
AP3S1Q92572 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
AP3S1Q92572 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
AP3S1Q92572 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
AP3S1Q92572 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
AP3S1Q92572 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
AP3S1Q92572 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.01□□□□□ -0.33
AP3S1Q92572 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
AP3S1Q92572 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
AP3S1Q92572 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.01□□□□□ -0.33
AP3S1Q92572 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.01□□□□□ -0.33
AP3S1Q92572 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
AP3S1Q92572 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.01□□□□□ -0.33
AP3S1Q92572 HCG4P8-203ENST00000443049 980 ntBASIC13.01□□□□□ -0.33
AP3S1Q92572 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.01□□□□□ -0.33
AP3S1Q92572 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.01□□□□□ -0.33
AP3S1Q92572 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.01□□□□□ -0.33
AP3S1Q92572 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.01□□□□□ -0.33
AP3S1Q92572 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.01□□□□□ -0.33
AP3S1Q92572 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.01□□□□□ -0.33
AP3S1Q92572 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
AP3S1Q92572 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.01□□□□□ -0.33
AP3S1Q92572 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.01□□□□□ -0.33
AP3S1Q92572 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.01□□□□□ -0.33
AP3S1Q92572 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 TUBB8P4-201ENST00000511806 1324 ntBASIC13.01□□□□□ -0.33
AP3S1Q92572 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 KRT8P12-202ENST00000472924 1397 ntBASIC13.01□□□□□ -0.33
AP3S1Q92572 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 AC009474.1-201ENST00000455096 1565 ntBASIC13.01□□□□□ -0.33
AP3S1Q92572 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.01□□□□□ -0.33
AP3S1Q92572 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.01□□□□□ -0.33
AP3S1Q92572 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.01□□□□□ -0.33
AP3S1Q92572 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.01□□□□□ -0.33
AP3S1Q92572 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
AP3S1Q92572 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms